RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SPATS2Q86XZ4 545 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 IQCGQ9H095 443 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 ANAPC5Q9UJX4 755 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 PCDHB4Q9Y5E5 795 aa11.92□□□□□ -0.5
SEMA4D-201ENST00000339861 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 CAND2O75155 1236 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 SESN3P58005 492 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 JAMLQ86YT9 394 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 FAM213AQ9BRX8 229 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 TAS2R14Q9NYV8 317 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 USP20Q9Y2K6 914 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 ARP10275 920 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 NPR1P16066 1061 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 RWDD2BP57060 319 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 CERS5Q8N5B7 392 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 KLHL29Q96CT2 875 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 CBWD1Q9BRT8 395 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 STK33Q9BYT3 514 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 FLT3P36888 993 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP2R5EQ16537 467 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 RHOT2Q8IXI1 618 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 KLHL14Q9P2G3 628 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 PI4K2BG5E9Z4 385 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 BFSP1Q12934 665 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 CPA5Q8WXQ8 436 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 SLITRK6Q9H5Y7 841 aa11.91□□□□□ -0.5
SEMA4D-201ENST00000339861 DENND3A2RUS2 1198 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 NOL4O94818 638 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 MXRA7P84157 204 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 SLC35C1Q96A29 364 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 ARHGEF26Q96DR7 871 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 CHMP6Q96FZ7 201 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 AGPAT3Q9NRZ7 376 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 ATP5DP30049 168 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 TM4SF1P30408 202 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 TRPC3Q13507 836 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 MTMR1Q13613 665 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 SYCP2LQ5T4T6 812 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 MICAL1Q8TDZ2 1067 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 EPS8L3Q8TE67 593 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 JDP2Q8WYK2 163 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 KAT5Q92993 513 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 KLC4Q9NSK0 619 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 CBWD6Q4V339 395 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 CBWD3Q5JTY5 395 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 CBWD5Q5RIA9 395 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 RAPGEF5Q92565 580 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 SYN2Q92777 582 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 TMEM206Q9H813 350 aa11.9□□□□□ -0.5
SEMA4D-201ENST00000339861 NID2Q14112 1375 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SPAG7O75391 227 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ERFP50548 548 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SOX10P56693 466 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ARSHQ5FYA8 562 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 CTAGE3PQ8IX95 158 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 N4BP2L2Q92802 583 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 KIF1AQ12756 1690 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ZBED4O75132 1171 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 FAM107AO95990 144 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 NT5C2P49902 561 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 POLGP54098 1239 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 KDM7AQ6ZMT4 941 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ERP44Q9BS26 406 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 AIPL1Q9NZN9 384 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SYNGAP1Q96PV0 1343 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 PJA2O43164 708 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms