RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SERPINI2O75830 405 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 FNTAP49354 379 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 HIRAP54198 1017 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STX1BP61266 288 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MAPK6Q16659 721 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 KLC3Q6P597 504 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 LINS1Q8NG48 757 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 XAGE3Q8WTP9 111 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MTMR12Q9C0I1 747 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 IGFLR1Q9H665 355 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 DNAAF2Q9NVR5 837 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RPTORQ8N122 1335 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STK36Q9NRP7 1315 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SCN8AQ9UQD0 1980 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 WDR64B1ANS9 1081 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ECE2O60344 883 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 KLHL41O60662 606 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CAND2O75155 1236 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ALAS1P13196 640 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MRPS35P82673 323 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 AP1B1Q10567 949 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SUZ12Q15022 739 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 C7orf57Q8NEG2 295 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 BHMT2Q9H2M3 363 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TAF1LQ8IZX4 1826 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 E7EVH7 732 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GNSP15586 552 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 KPNB1Q14974 876 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 DNAJC10Q8IXB1 793 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PLBD2Q8NHP8 589 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 USP13Q92995 863 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TUBGCP3Q96CW5 907 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM237Q96Q45 408 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 XPO6Q96QU8 1125 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 POLR3CQ9BUI4 534 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RBSNQ9H1K0 784 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GGA3Q9NZ52 723 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ANO9A1A5B4 782 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GRM8O00222 908 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ORC4O43929 436 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SYT1P21579 422 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 DHX32Q7L7V1 743 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 IL17REQ8NFR9 667 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CEP95Q96GE4 821 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PBKQ96KB5 322 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 USP28Q96RU2 1077 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 LIMA1Q9UHB6 759 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SAP30BPQ9UHR5 308 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 AP4S1Q9Y587 144 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SAR1BQ9Y6B6 198 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SYNGAP1Q96PV0 1343 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 UNCXA6NJT0 531 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STXBP3O00186 592 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 IKBKBO14920 756 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC22O60826 627 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 KRT38O76015 456 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ADCY5O95622 1261 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ITGA6P23229 1130 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GCKP35557 465 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ST13P50502 369 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 METAP2P50579 478 aaKnown RBP eCLIP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 POLGP54098 1239 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PHEXP78562 749 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TAP1Q03518 808 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 USH1GQ495M9 461 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM67Q5HYA8 995 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 C6orf118Q5T5N4 469 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RFX8Q6ZV50 586 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RAB42Q8N4Z0 105 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CEMIPQ8WUJ3 1361 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SAAL1Q96ER3 474 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SIGLEC1Q9BZZ2 1709 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF638Q14966 1978 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 FLT1P17948 1338 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PI4KAP2A4QPH2 592 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ENC1O14682 589 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ZBTB43O43298 467 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MTSS1O43312 755 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STRNO43815 780 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 OGNP20774 298 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STAT1P42224 750 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 AK2P54819 239 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 COG2Q14746 738 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 WTAPQ15007 396 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CCNG2Q16589 344 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 UGP2Q16851 508 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 HP1BP3Q5SSJ5 553 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 ACBD5Q5T8D3 534 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RSRC2Q7L4I2 434 aaKnown RBP3.5□□□□□ -1.85
CSMD3-202ENST00000339701 RHOT2Q8IXI1 618 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 PI4KAP1Q8N8J0 262 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STAG1Q8WVM7 1258 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 BSNDQ8WZ55 320 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 MAGED4Q96JG8 741 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 FAM161BQ96MY7 647 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 CREBZFQ9NS37 354 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 STMN3Q9NZ72 180 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 GMEB1Q9Y692 573 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM110-MUSTN1A8MSY1 372 aa3.5□□□□□ -1.85
CSMD3-202ENST00000339701 SPTLC2O15270 562 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 817.9 ms