RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 PRPF6O94906 941 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 FGFR1OPO95684 399 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 CYP2C9P11712 490 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 STRN3Q13033 797 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 ITGA7Q13683 1181 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 NCAPHQ15003 741 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 ZCWPW2Q504Y3 356 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 NELFCDQ8IXH7 590 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 SYCP3Q8IZU3 236 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 NME8Q8N427 588 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 RNF149Q8NC42 400 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 NOC3LQ8WTT2 800 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 SEMA6BQ9H3T3 888 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 TMEM134Q9H6X4 195 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 TBX20Q9UMR3 447 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 TRAF3IP3Q9Y228 551 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 NFE2L3Q9Y4A8 694 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 ADGRA3Q8IWK6 1321 aa15.98■□□□□ 0.15
NIPAL3-202ENST00000339255 ZMYM2Q9UBW7 1377 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 HOXD13P35453 343 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 STX17P56962 302 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 RSPH3Q86UC2 560 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 CSGALNACT2Q8N6G5 542 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 NLRP4Q96MN2 994 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 MED15Q96RN5 788 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 KIFC3Q9BVG8 833 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 STARD7Q9NQZ5 370 aa15.97■□□□□ 0.15
NIPAL3-202ENST00000339255 K7ERI5 159 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 TREHO43280 583 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 CALUO43852 315 aaPredicted RBP15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 SRGAP2CP0DJJ0 459 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 PTENP60484 403 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 FKBP3Q00688 224 aaKnown RBP15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 NFIL3Q16649 462 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 MAPK6Q16659 721 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 ANKRD40Q6AI12 368 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 SERINC5Q86VE9 423 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 FAM114A1Q8IWE2 563 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 U2AF1L4Q8WU68 220 aaKnown RBP15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 TMEM174Q8WUU8 243 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
NIPAL3-202ENST00000339255 TRIM49BA6NDI0 452 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 SGPL1O95470 568 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 RPL13P26373 211 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 GPC3P51654 580 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 KCNA1Q09470 495 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 HIC1Q14526 733 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 HSP90AA2PQ14568 343 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 ANKLE1Q8NAG6 615 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 SLC43A3Q8NBI5 491 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 SCLT1Q96NL6 688 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 FAM49AQ9H0Q0 323 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 THAP9Q9H5L6 903 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 GRIN2DO15399 1336 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 HNRNPDLO14979 420 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 VTNP04004 478 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 SPAG1Q07617 926 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 MYBPC2Q14324 1141 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 RUFY4Q6ZNE9 571 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 CEP63Q96MT8 703 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 DUSP9Q99956 384 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 IFT122Q9HBG6 1241 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 FANCLQ9NW38 375 aa15.95■□□□□ 0.14
NIPAL3-202ENST00000339255 TGFB1I1O43294 461 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 PIGRP01833 764 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 ZNF18P17022 549 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 GJA8P48165 433 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 NLRP11P59045 1033 aaKnown RBP15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 PTGISQ16647 500 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 CDKAL1Q5VV42 579 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 ZPBP2Q6X784 338 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 SRGAP1Q7Z6B7 1085 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 C12orf56Q8IXR9 622 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 ANKRD20A12PQ8NF67 263 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 DNAJB3Q8WWF6 145 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 NLRP7Q8WX94 980 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 AGPAT3Q9NRZ7 376 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 NOD1Q9Y239 953 aa15.94■□□□□ 0.14
NIPAL3-202ENST00000339255 BRCA2P51587 3418 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 M0QZ92 97 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 ARVCFO00192 962 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 CAND2O75155 1236 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 GNA14O95837 355 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 TFRCP02786 760 aaKnown RBP15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 NR3C1P04150 777 aa15.93■□□□□ 0.14
NIPAL3-202ENST00000339255 NR2F2P24468 414 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms