RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 LAMC2Q13753 1193 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 TUBB2AQ13885 445 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 EEPD1Q7L9B9 569 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
HPS1-202ENST00000338546 USP37Q86T82 979 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 MSL3Q8N5Y2 521 aaKnown RBP17.74■□□□□ 0.43
HPS1-202ENST00000338546 FBXL18Q96ME1 805 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 TUBB2BQ9BVA1 445 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 TSGA10Q9BZW7 698 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 ARHGAP20Q9P2F6 1191 aa17.74■□□□□ 0.43
HPS1-202ENST00000338546 REXO2Q9Y3B8 237 aaKnown RBP17.74■□□□□ 0.43
HPS1-202ENST00000338546 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
HPS1-202ENST00000338546 SLC9A1P19634 815 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 IRF5Q13568 498 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 GRB14Q14449 540 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 ASTE1Q2TB18 679 aaPredicted RBP17.73■□□□□ 0.43
HPS1-202ENST00000338546 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
HPS1-202ENST00000338546 ATP8B4Q8TF62 1192 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 EMID1Q96A84 441 aaPredicted RBP17.73■□□□□ 0.43
HPS1-202ENST00000338546 CBWD1Q9BRT8 395 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 SMARCAD1Q9H4L7 1026 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 TMEM134Q9H6X4 195 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 KIAA1586Q9HCI6 787 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 LZTFL1Q9NQ48 299 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 GCNT4Q9P109 453 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 USP20Q9Y2K6 914 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 TRPM7Q96QT4 1865 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
HPS1-202ENST00000338546 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 KRT86O43790 486 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 SORBS3O60504 671 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 PIGRP01833 764 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 VAMP7P51809 220 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 CST9Q5W186 159 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 HGSNATQ68CP4 663 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 SPATA33Q96N06 139 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 NLRC4Q9NPP4 1024 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 LUC7LQ9NQ29 371 aaKnown RBP17.72■□□□□ 0.43
HPS1-202ENST00000338546 SLC5A4Q9NY91 659 aa17.72■□□□□ 0.43
HPS1-202ENST00000338546 MANSC4A6NHS7 340 aaPredicted RBP17.71■□□□□ 0.43
HPS1-202ENST00000338546 AKR1B10O60218 316 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 EIF4A3P38919 411 aaKnown RBP17.71■□□□□ 0.43
HPS1-202ENST00000338546 KIF11P52732 1056 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 VAV2P52735 878 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 IER5Q5VY09 327 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 GPR142Q7Z601 462 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 PLEKHH3Q7Z736 793 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 KIAA1328Q86T90 577 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 TMC2Q8TDI7 906 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 GLG1Q92896 1179 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 SPAG5Q96R06 1193 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 PTPN18Q99952 460 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 SIX2Q9NPC8 291 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 STYXL1Q9Y6J8 313 aa17.71■□□□□ 0.43
HPS1-202ENST00000338546 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 SLU7O95391 586 aaKnown RBP17.7■□□□□ 0.42
HPS1-202ENST00000338546 GLRA2P23416 452 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 ADSSP30520 456 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 GTF2H1P32780 548 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 PRKCIP41743 596 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 HUNKP57058 714 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 STRN3Q13033 797 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 ASIC2Q16515 512 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 TAPT1Q6NXT6 567 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 MFSD14AQ96MC6 490 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 PCIF1Q9H4Z3 704 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 ZNF236Q9UL36 1845 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 ADGRA3Q8IWK6 1321 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 IGKV6-21A0A0C4DH24 114 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 HBP1O60381 514 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 TLR2O60603 784 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 GH1P01241 217 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 EFNA5P52803 228 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 JAM2P57087 298 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 INHBEP58166 350 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 MYL7Q01449 175 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 KIF5AQ12840 1032 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 MKRN3Q13064 507 aaKnown RBP17.7■□□□□ 0.42
HPS1-202ENST00000338546 MXD4Q14582 209 aaPredicted RBP17.7■□□□□ 0.42
HPS1-202ENST00000338546 SNRNP35Q16560 246 aaKnown RBP17.7■□□□□ 0.42
HPS1-202ENST00000338546 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 WDR24Q96S15 920 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 STK33Q9BYT3 514 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.7■□□□□ 0.42
HPS1-202ENST00000338546 MCM3APO60318 1980 aa17.7■□□□□ 0.42
HPS1-202ENST00000338546 ANKRD63C9JTQ0 380 aa17.69■□□□□ 0.42
HPS1-202ENST00000338546 HNRNPDLO14979 420 aaKnown RBP17.69■□□□□ 0.42
HPS1-202ENST00000338546 PJA2O43164 708 aa17.69■□□□□ 0.42
HPS1-202ENST00000338546 GFPT2O94808 682 aa17.69■□□□□ 0.42
HPS1-202ENST00000338546 CCDC172P0C7W6 258 aa17.69■□□□□ 0.42
HPS1-202ENST00000338546 ACTN1P12814 892 aa17.69■□□□□ 0.42
HPS1-202ENST00000338546 SOX10P56693 466 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms