RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 POTEEQ6S8J3 1075 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CCDC105Q8IYK2 499 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 TXLNGYQ9BZA5 131 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 TAOK3Q9H2K8 898 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CD209Q9NNX6 404 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 SPATS2LQ9NUQ6 558 aaKnown RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 KRT16P08779 473 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 ZBTB48P10074 688 aaPredicted RBP14.8□□□□□ -0.04
SYNE3-201ENST00000334258 RARAP10276 462 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 TNFAIP3P21580 790 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 COPS2P61201 443 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CNGA2Q16280 664 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 DCAF12L1Q5VU92 463 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 MAEAQ7L5Y9 396 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 CROCCP2Q86T23 111 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 SFR1Q86XK3 245 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
SYNE3-201ENST00000334258 ACSL3O95573 720 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 LMNB1P20700 586 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 RPL13P26373 211 aaKnown RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 DHX34Q14147 1143 aaKnown RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 SLMAPQ14BN4 828 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 SPDYCQ5MJ68 293 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ZBTB10Q96DT7 871 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 YIPF3Q9GZM5 350 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 CARD9Q9H257 536 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 PNMA3Q9UL41 463 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 TRIM33Q9UPN9 1127 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 COL5A3P25940 1745 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 RPL21P46778 160 aaKnown RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 NPEPPSP55786 919 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ADCY1Q08828 1119 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ARHGAP44Q17R89 818 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 CLEC10AQ8IUN9 316 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 NEDD1Q8NHV4 660 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 TBC1D16Q8TBP0 767 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ARHGEF2Q92974 986 aaKnown RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 RBM17Q96I25 401 aaKnown RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 CTTNBP2NLQ9P2B4 639 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 INTUQ9ULD6 942 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ARAP2Q8WZ64 1704 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 EDIL3O43854 480 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 GCNT3O95395 438 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 NR3C1P04150 777 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 EPHA7Q15375 998 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ZDHHC24Q6UX98 284 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 GBP7Q8N8V2 638 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 LNX1Q8TBB1 728 aaPredicted RBP14.79□□□□□ -0.04
SYNE3-201ENST00000334258 ALG3Q92685 438 aa14.79□□□□□ -0.04
SYNE3-201ENST00000334258 MYH1P12882 1939 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 MYH4Q9Y623 1939 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 RPTORQ8N122 1335 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 TMEM120BA0PK00 339 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 DDX3YO15523 660 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 MSH2P43246 934 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 ZNF131P52739 623 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 PLS1Q14651 629 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 TAF11Q15544 211 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 THAP2Q9H0W7 228 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 METTL14Q9HCE5 456 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 SCAF8Q9UPN6 1271 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 IGSF9BQ9UPX0 1349 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 CALCOCO2Q13137 446 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 AUHQ13825 339 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 ARHGEF26Q96DR7 871 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 PARP2Q9UGN5 583 aa14.78□□□□□ -0.04
SYNE3-201ENST00000334258 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 DIS3Q9Y2L1 958 aaKnown RBP14.78□□□□□ -0.04
SYNE3-201ENST00000334258 ANXA13P27216 316 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 GSTO1P78417 241 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 SLC27A3Q5K4L6 730 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 CCDC137Q6PK04 289 aaKnown RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 SPATA21Q7Z572 469 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 UBL4BQ8N7F7 174 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 CHORDC1Q9UHD1 332 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 DNAJC12Q9UKB3 198 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 TTC7AQ9ULT0 858 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 LRRN2O75325 713 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 TMEM253P0C7T8 217 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 SOX5P35711 763 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 SLC16A2P36021 539 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 ANKRD20A2Q5SQ80 823 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 ANKRD20A1Q5TYW2 823 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 ANKRD20A3Q5VUR7 823 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 EXOC3L1Q86VI1 746 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 SLC35C1Q96A29 364 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 PAIP2Q9BPZ3 127 aaKnown RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 TRIM7Q9C029 511 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 PSTPIP2Q9H939 334 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 DNAJC17Q9NVM6 304 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms