RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 EXOC7Q9UPT5 735 aa17.28■□□□□ 0.36
PDGFB-201ENST00000331163 DGAT1O75907 488 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 MAPK4P31152 587 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 PSMC2P35998 433 aaKnown RBP17.27■□□□□ 0.36
PDGFB-201ENST00000331163 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 KIAA0753Q2KHM9 967 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 FARP2O94887 1054 aaPredicted RBP17.27■□□□□ 0.36
PDGFB-201ENST00000331163 COPB2P35606 906 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 IFNL1Q8IU54 200 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 WDR24Q96S15 920 aa17.27■□□□□ 0.36
PDGFB-201ENST00000331163 ASTN1O14525 1302 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 CLDN3O15551 220 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 GFPT2O94808 682 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 GJC1P36383 396 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 PSMD2Q13200 908 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 CNGA4Q8IV77 575 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 C7orf31Q8N865 590 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 CAGE1Q8TC20 777 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 CD99L2Q8TCZ2 262 aa17.27■□□□□ 0.35
PDGFB-201ENST00000331163 PLS3P13797 630 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
PDGFB-201ENST00000331163 CATSPER4Q7RTX7 472 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 CPB2Q96IY4 423 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 L2HGDHQ9H9P8 463 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 MKI67P46013 3256 aaKnown RBP17.26■□□□□ 0.35
PDGFB-201ENST00000331163 MAFGO15525 162 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 RHOXF2BP0C7M4 288 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 TRIM32Q13049 653 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 ZNF569Q5MCW4 686 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 LEKR1Q6ZMV7 388 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 ZNF720Q7Z2F6 126 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 TLK2Q86UE8 772 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 RETREG2Q8NC44 543 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 BSNDQ8WZ55 320 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 CHORDC1Q9UHD1 332 aaPredicted RBP17.26■□□□□ 0.35
PDGFB-201ENST00000331163 CNMDO75829 334 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
PDGFB-201ENST00000331163 PRKCZQ05513 592 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 KLHL30Q0D2K2 578 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 MAPK6Q16659 721 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 TOGARAM2Q6ZUX3 1019 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 OR8K1Q8NGG5 319 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 INTS13Q9NVM9 706 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 PARP2Q9UGN5 583 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
PDGFB-201ENST00000331163 A0A087WZ62 844 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 FAM110CQ1W6H9 321 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 MAML3Q96JK9 1138 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 FDXACB1Q9BRP7 624 aaPredicted RBP17.25■□□□□ 0.35
PDGFB-201ENST00000331163 PARD6BQ9BYG5 372 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 THAP9Q9H5L6 903 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 PDE11AQ9HCR9 933 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 TYW1Q9NV66 732 aaKnown RBP17.25■□□□□ 0.35
PDGFB-201ENST00000331163 ERAP1Q9NZ08 941 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 MYO1CO00159 1063 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 BUB1O43683 1085 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 TOMM70O94826 608 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 PLEKP08567 350 aaPredicted RBP17.25■□□□□ 0.35
PDGFB-201ENST00000331163 ZNF568Q3ZCX4 644 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 GLRA4Q5JXX5 417 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 UBE2TQ9NPD8 197 aaPredicted RBP17.25■□□□□ 0.35
PDGFB-201ENST00000331163 HSPBP1Q9NZL4 362 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 IMPACTQ9P2X3 320 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 EMSYQ7Z589 1322 aa17.25■□□□□ 0.35
PDGFB-201ENST00000331163 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 TADA3O75528 432 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CALCAP01258 141 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 AFPP02771 609 aaKnown RBP17.24■□□□□ 0.35
PDGFB-201ENST00000331163 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CELF3Q5SZQ8 465 aaKnown RBP17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 MFSD14CQ5VZR4 134 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 XXYLT1Q8NBI6 393 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 JAKMIP2Q96AA8 810 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 MMS19Q96T76 1030 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 OSMRQ99650 979 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 AGPAT3Q9NRZ7 376 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 CWC15Q9P013 229 aaKnown RBP17.24■□□□□ 0.35
PDGFB-201ENST00000331163 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 LTBP1Q14766 1721 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 LGALS16A8MUM7 142 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 STRNO43815 780 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 FCGRTP55899 365 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 FKBP1BP68106 108 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 MYL7Q01449 175 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 TRPC3Q13507 836 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 EPC2Q52LR7 807 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 C4orf19Q8IY42 314 aa17.24■□□□□ 0.35
PDGFB-201ENST00000331163 NEK9Q8TD19 979 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms