RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CFAP61Q8NHU2 1237 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 FBXO41Q8TF61 875 aa26.18■■□□□ 1.78
SOX1-201ENST00000330949 GM2AP17900 193 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 STX2P32856 288 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 COASYQ13057 564 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 MAGEB18Q96M61 343 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 TTC36A6NLP5 189 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 PHF2O75151 1096 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 ACTN1P12814 892 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 HSPA6P17066 643 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 RASSF2P50749 326 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 ARMC3Q5W041 872 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 GDAP1Q8TB36 358 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 DCLRE1BQ9H816 532 aa26.17■■□□□ 1.78
SOX1-201ENST00000330949 MYH14Q7Z406 1995 aaKnown RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 PDLIM1O00151 329 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 NVLO15381 856 aaKnown RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 MECOMQ03112 1051 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 CGB2Q6NT52 195 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 LONP2Q86WA8 852 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 MYLK2Q9H1R3 596 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 STOML1Q9UBI4 398 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 SEC63Q9UGP8 760 aaKnown RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 ARMCX3Q9UH62 379 aaPredicted RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 MINPP1Q9UNW1 487 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 PTGIRP43119 386 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 TMEM266Q2M3C6 531 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 PARP10Q53GL7 1025 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 TRMT10CQ7L0Y3 403 aaKnown RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 SESTD1Q86VW0 696 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 RAB34Q9BZG1 259 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 PPP1R9AQ9ULJ8 1098 aa26.16■■□□□ 1.78
SOX1-201ENST00000330949 ZBTB12Q9Y330 459 aaPredicted RBP26.16■■□□□ 1.78
SOX1-201ENST00000330949 LONRF1Q17RB8 773 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 PNMA1Q8ND90 353 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 MAIP1Q8WWC4 291 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 RFFLQ8WZ73 363 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 MLXIPLQ9NP71 852 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 MROH7Q68CQ1 1323 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 GALCP54803 685 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 GRM4Q14833 912 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 ARHGEF18Q6ZSZ5 1173 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 U2AF1L4Q8WU68 220 aaKnown RBP26.15■■□□□ 1.78
SOX1-201ENST00000330949 ZNF333Q96JL9 665 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 PCMTD2Q9NV79 361 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 LMCD1Q9NZU5 365 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 PCYOX1Q9UHG3 505 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 SLC9A1P19634 815 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 RXRBP28702 533 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 FXR2P51116 673 aaKnown RBP eCLIP26.15■■□□□ 1.78
SOX1-201ENST00000330949 POLGP54098 1239 aaPredicted RBP26.15■■□□□ 1.78
SOX1-201ENST00000330949 ATL2Q8NHH9 583 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 C18orf8Q96DM3 657 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 ERP27Q96DN0 273 aa26.15■■□□□ 1.78
SOX1-201ENST00000330949 PFASO15067 1338 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 A0A1B0GVG6 124 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 H0Y3Z8 333 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 USP17L8P0C7I0 530 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 SKIP12755 728 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 RBM46Q8TBY0 533 aaKnown RBP26.14■■□□□ 1.78
SOX1-201ENST00000330949 PITPNM3Q9BZ71 974 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 CPVLQ9H3G5 476 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 OSGEPQ9NPF4 335 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 NCANO14594 1321 aa26.14■■□□□ 1.78
SOX1-201ENST00000330949 DDX3XO00571 662 aaKnown RBP eCLIP26.14■■□□□ 1.77
SOX1-201ENST00000330949 CREB1P16220 341 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 VHLP40337 213 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 YARSP54577 528 aaKnown RBP26.14■■□□□ 1.77
SOX1-201ENST00000330949 RNASELQ05823 741 aaKnown RBP26.14■■□□□ 1.77
SOX1-201ENST00000330949 EXOC3L4Q17RC7 722 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 PTF1AQ7RTS3 328 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 TRIM74Q86UV6 250 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 TRIM73Q86UV7 250 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 SLC35G2Q8TBE7 412 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 LRRC37BQ96QE4 947 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 USP20Q9Y2K6 914 aa26.14■■□□□ 1.77
SOX1-201ENST00000330949 POTEFA5A3E0 1075 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 GFPT2O94808 682 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 POTEIP0CG38 1075 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 POTEJP0CG39 1038 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 DPY19L2P1Q6NXN4 242 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 POTEEQ6S8J3 1075 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 DYNLL2Q96FJ2 89 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 TBC1D10AQ9BXI6 508 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 FAM192AQ9GZU8 254 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 SYNGAP1Q96PV0 1343 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 CETN3O15182 167 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 BRAFP15056 766 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 TARSP26639 723 aaKnown RBP26.13■■□□□ 1.77
SOX1-201ENST00000330949 STRN3Q13033 797 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 KRT79Q5XKE5 535 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 DGKHQ86XP1 1220 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 DMAP1Q9NPF5 467 aaPredicted RBP26.13■■□□□ 1.77
SOX1-201ENST00000330949 NMRK1Q9NWW6 199 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 MCM9Q9NXL9 1143 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 MAD2L2Q9UI95 211 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 HAO1Q9UJM8 370 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 HDAC9Q9UKV0 1011 aa26.13■■□□□ 1.77
SOX1-201ENST00000330949 GNA11P29992 359 aa26.12■■□□□ 1.77
SOX1-201ENST00000330949 NAPAP54920 295 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms