RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 GATMP50440 423 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 SLC12A3P55017 1021 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 FAM189BP81408 668 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 POU5F1BQ06416 359 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 RAD51AP2Q09MP3 1159 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 DHX8Q14562 1220 aaKnown RBP17.12■□□□□ 0.33
TSFM-201ENST00000323833 FAM43BQ6ZT52 329 aaPredicted RBP17.12■□□□□ 0.33
TSFM-201ENST00000323833 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
TSFM-201ENST00000323833 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
TSFM-201ENST00000323833 PRDM12Q9H4Q4 367 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
TSFM-201ENST00000323833 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
TSFM-201ENST00000323833 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 MCM6Q14566 821 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
TSFM-201ENST00000323833 DAW1Q8N136 415 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 MYLIPQ8WY64 445 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 RAD54LQ92698 747 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 KIFAP3Q92845 792 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
TSFM-201ENST00000323833 NFKBIZQ9BYH8 718 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 TDRD15B5MCY1 1934 aaKnown RBP17.11■□□□□ 0.33
TSFM-201ENST00000323833 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 CDH23Q9H251 3354 aa17.11■□□□□ 0.33
TSFM-201ENST00000323833 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 SFI1A8K8P3 1242 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 RFXAPO00287 272 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 TSPAN1O60635 241 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 ERLIN2O94905 339 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
TSFM-201ENST00000323833 NAMPTP43490 491 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
TSFM-201ENST00000323833 MAPK7Q13164 816 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
TSFM-201ENST00000323833 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 CDCA2Q69YH5 1023 aaPredicted RBP17.1■□□□□ 0.33
TSFM-201ENST00000323833 ATL3Q6DD88 541 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 ECHDC2Q86YB7 292 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 ARNTL2Q8WYA1 636 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 C17orf80Q9BSJ5 609 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 TMEM161AQ9NX61 479 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 CFAP45Q9UL16 551 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
TSFM-201ENST00000323833 A0A087X0B3 334 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 B4GALT5O43286 388 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 CUTAO60888 179 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 FGFR1P11362 822 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 TXLNAP40222 546 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 PEX3P56589 373 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
TSFM-201ENST00000323833 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 AMHR2Q16671 573 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 RRAGBQ5VZM2 374 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 GPBP1Q86WP2 473 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 ZBTB8OSQ8IWT0 167 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 FIBCD1Q8N539 461 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 DEPTORQ8TB45 409 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
TSFM-201ENST00000323833 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
TSFM-201ENST00000323833 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
TSFM-201ENST00000323833 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
TSFM-201ENST00000323833 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
TSFM-201ENST00000323833 ARF4P18085 180 aaPredicted RBP17.08■□□□□ 0.32
TSFM-201ENST00000323833 LIG1P18858 919 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
TSFM-201ENST00000323833 DDIT3P35638 169 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 ME1P48163 572 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 ERVK-21P61565 698 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 LONRF3Q496Y0 759 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 UBXN11Q5T124 520 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 AXDND1Q5T1B0 1012 aaPredicted RBP17.08■□□□□ 0.32
TSFM-201ENST00000323833 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
TSFM-201ENST00000323833 KCNG4Q8TDN1 519 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 TIPINQ9BVW5 301 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 FAM105AQ9NUU6 356 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 RNF19AQ9NV58 838 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 USP20Q9Y2K6 914 aa17.08■□□□□ 0.32
TSFM-201ENST00000323833 TTLL13PA6NNM8 815 aa17.07■□□□□ 0.32
TSFM-201ENST00000323833 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms