RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
NCL-201ENST00000322723 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
NCL-201ENST00000322723 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 ERCC3P19447 782 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 DGKZQ13574 1117 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 MTMR1Q13613 665 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 SRLQ86TD4 932 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 FAM71BQ8TC56 605 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 MTA2O94776 668 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 PTPRAP18433 802 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 DSG3P32926 999 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
NCL-201ENST00000322723 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 CLDN10P78369 228 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 KRT76Q01546 638 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 RPAINQ86UA6 219 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 MGAMO43451 1857 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 CHMP2AO43633 222 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 ATP9AO75110 1047 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 STAM2O75886 525 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 TMEM253P0C7T8 217 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 ODR4Q5SWX8 454 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 MAP4K3Q8IVH8 894 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 RAVER2Q9HCJ3 691 aaKnown RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 ATG7O95352 703 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 PSMC5P62195 406 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 TTC19Q6DKK2 380 aaPredicted RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 DEFB132Q7Z7B7 95 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 KSR1Q8IVT5 923 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 C17orf75Q9HAS0 396 aa13.04□□□□□ -0.32
NCL-201ENST00000322723 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
NCL-201ENST00000322723 BACH1O14867 736 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 EVI5O60447 810 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 STAT1P42224 750 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 MAP9Q49MG5 647 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 OTUD6BQ8N6M0 293 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 CAPZA3Q96KX2 299 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 JPH2Q9BR39 696 aaPredicted RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 RIPK3Q9Y572 518 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 KIF4AO95239 1232 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 GMPSP49915 693 aaPredicted RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 MTMR2Q13614 643 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.03□□□□□ -0.321e-16■□□□□ 8.3
NCL-201ENST00000322723 PBKQ96KB5 322 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 SCLT1Q96NL6 688 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 MTFR1LQ9H019 292 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 N4BP1O75113 896 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 ECHS1P30084 290 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 ADSSP30520 456 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 ICAM3P32942 547 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 EMC10Q5UCC4 262 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 ALKBH5Q6P6C2 394 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 ANO5Q75V66 913 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
NCL-201ENST00000322723 ISCUQ9H1K1 167 aa13.03□□□□□ -0.32
NCL-201ENST00000322723 FLOT1O75955 427 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.32
NCL-201ENST00000322723 POU5F1Q01860 360 aaKnown RBP13.02□□□□□ -0.32
NCL-201ENST00000322723 SLC39A4Q6P5W5 647 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 C15orf39Q6ZRI6 1047 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 MICALL2Q8IY33 904 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 MFSD14AQ96MC6 490 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 SELENOOQ9BVL4 669 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 STIM2Q9P246 746 aa13.02□□□□□ -0.32
NCL-201ENST00000322723 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 DDX3YO15523 660 aaKnown RBP13.02□□□□□ -0.33
NCL-201ENST00000322723 BUB1O43683 1085 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 CCT5P48643 541 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 DNA2P51530 1060 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 PPP3CAQ08209 521 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 CFAP221Q4G0U5 840 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
NCL-201ENST00000322723 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms