RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLCO1B3Q9NPD5 702 aa15.3■□□□□ 0.04
PABPC1-201ENST00000318607 ZMYND8Q9ULU4 1186 aaPredicted RBP15.3■□□□□ 0.04
PABPC1-201ENST00000318607 HIP1RO75146 1068 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 CFBP00751 764 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 IFNB1P01574 187 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 DCAF12L1Q5VU92 463 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 ZNF513Q8N8E2 541 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 ERP27Q96DN0 273 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 KLHL14Q9P2G3 628 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 M0R2N6 131 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 MXRA7P84157 204 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 OVGP1Q12889 678 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 FAXDC2Q96IV6 333 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 KIF1CO43896 1103 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 KRT5P13647 590 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 COMTP21964 271 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 LRIG3Q6UXM1 1119 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 YTHDF3Q7Z739 585 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 SYCE1Q8N0S2 351 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
PABPC1-201ENST00000318607 NKIRAS1Q9NYS0 192 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 C15orf41Q9Y2V0 281 aa15.29■□□□□ 0.04
PABPC1-201ENST00000318607 ZNF335Q9H4Z2 1342 aaPredicted RBP15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CCDC188H7C350 402 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CBX6O95503 412 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 MYH7P12883 1935 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 PYGMP11217 842 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 CD302Q8IX05 232 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 MREGQ8N565 214 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 SAAL1Q96ER3 474 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
PABPC1-201ENST00000318607 GDF11O95390 407 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 LCA5LO95447 670 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 MMP14P50281 582 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ARSHQ5FYA8 562 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 MDH1BQ5I0G3 518 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 FBXO33Q7Z6M2 555 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 FITM2Q8N6M3 262 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 LRRC57Q8N9N7 239 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ACTRT1Q8TDG2 376 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ZNF570Q96NI8 536 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 TAOK3Q9H2K8 898 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 HOMER3Q9NSC5 361 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 G3BP2Q9UN86 482 aaKnown RBP15.27■□□□□ 0.04
PABPC1-201ENST00000318607 COG5Q9UP83 839 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 USP15Q9Y4E8 981 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-201ENST00000318607 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 PDE6CP51160 858 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ODR4Q5SWX8 454 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 TTC27Q6P3X3 843 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 FBF1Q8TES7 1133 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ACSF2Q96CM8 615 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-201ENST00000318607 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 JMJD4Q9H9V9 463 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.04
PABPC1-201ENST00000318607 ENTPD5O75356 428 aa15.27■□□□□ 0.03
PABPC1-201ENST00000318607 XRCC4Q13426 336 aa15.27■□□□□ 0.03
PABPC1-201ENST00000318607 DRP2Q13474 957 aa15.27■□□□□ 0.03
PABPC1-201ENST00000318607 EXOC3L1Q86VI1 746 aa15.27■□□□□ 0.03
PABPC1-201ENST00000318607 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.03
PABPC1-201ENST00000318607 ARMC2Q8NEN0 867 aa15.27■□□□□ 0.03
PABPC1-201ENST00000318607 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.03
PABPC1-201ENST00000318607 PPP1R11O60927 126 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 RPL13P26373 211 aaKnown RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 CHKAP35790 457 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 CPA2P48052 419 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 NCALDP61601 193 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 SGO2Q562F6 1265 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ANKRD20A2Q5SQ80 823 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ANKRD20A1Q5TYW2 823 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ANKRD20A3Q5VUR7 823 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 GALNT17Q6IS24 598 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 TAOK1Q7L7X3 1001 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 RNF217Q8TC41 542 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 TRIM7Q9C029 511 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 AIPL1Q9NZN9 384 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 CPSF2Q9P2I0 782 aaKnown RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
PABPC1-201ENST00000318607 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
PABPC1-201ENST00000318607 ZBTB16Q05516 673 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms