RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 PCDHB13Q9Y5F0 798 aa27.32■■□□□ 1.96
CDPF1-201ENST00000314567 TTC26A0AVF1 554 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 TRIM21P19474 475 aaKnown RBP27.31■■□□□ 1.96
CDPF1-201ENST00000314567 IGBP1P78318 339 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 FAM102BQ5T8I3 360 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 KAT2BQ92831 832 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 DRC1Q96MC2 740 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 PTPN22Q9Y2R2 807 aa27.31■■□□□ 1.96
CDPF1-201ENST00000314567 SLC16A3O15427 465 aaKnown RBP27.3■■□□□ 1.96
CDPF1-201ENST00000314567 NMT1P30419 496 aaKnown RBP27.3■■□□□ 1.96
CDPF1-201ENST00000314567 CPT1AP50416 773 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 PRMT2P55345 433 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 PPP2R3AQ06190 1150 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 FRMD5Q7Z6J6 570 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 OR8K1Q8NGG5 319 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 FAM167AQ96KS9 214 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 DNAJC7Q99615 494 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 XPNPEP3Q9NQH7 507 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 PDLIM7Q9NR12 457 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 ZMYM2Q9UBW7 1377 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 POLGP54098 1239 aaPredicted RBP27.3■■□□□ 1.96
CDPF1-201ENST00000314567 GJA9P57773 515 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 GNASQ5JWF2 1037 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 PCMTD1Q96MG8 357 aaPredicted RBP27.3■■□□□ 1.96
CDPF1-201ENST00000314567 PPP2R2CQ9Y2T4 447 aa27.3■■□□□ 1.96
CDPF1-201ENST00000314567 HSPA8P11142 646 aaKnown RBP27.29■■□□□ 1.96
CDPF1-201ENST00000314567 INSRRP14616 1297 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 SLC26A2P50443 739 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 EMC2Q15006 297 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 CYP26C1Q6V0L0 522 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 SLC17A8Q8NDX2 589 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 TMEM143Q96AN5 459 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 STRA6Q9BX79 667 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 SIK3Q9Y2K2 1263 aa27.29■■□□□ 1.96
CDPF1-201ENST00000314567 PPP1R37O75864 691 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 DGAT1O75907 488 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 NR3C1P04150 777 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 DRP2Q13474 957 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 TSR1Q2NL82 804 aaKnown RBP27.28■■□□□ 1.96
CDPF1-201ENST00000314567 GOLGA5Q8TBA6 731 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 ATP6V0A4Q9HBG4 840 aa27.28■■□□□ 1.96
CDPF1-201ENST00000314567 METTL14Q9HCE5 456 aaKnown RBP27.28■■□□□ 1.96
CDPF1-201ENST00000314567 DDX20Q9UHI6 824 aaKnown RBP27.28■■□□□ 1.96
CDPF1-201ENST00000314567 ZNF215Q9UL58 517 aaPredicted RBP27.28■■□□□ 1.96
CDPF1-201ENST00000314567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.28■■□□□ 1.96
CDPF1-201ENST00000314567 RNF225M0QZC1 329 aaPredicted RBP27.27■■□□□ 1.96
CDPF1-201ENST00000314567 HBP1O60381 514 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 ADAMTS4O75173 837 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 PLS3P13797 630 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 ZBED6P86452 979 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 BSNDQ8WZ55 320 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 DHX33Q9H6R0 707 aaKnown RBP27.27■■□□□ 1.96
CDPF1-201ENST00000314567 EVPLQ92817 2033 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 SOWAHDA6NJG2 315 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 TGFB1I1O43294 461 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 F2P00734 622 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 LBX1P52954 281 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 KIAA0753Q2KHM9 967 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 HS2ST1Q7LGA3 356 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 ZNF397Q8NF99 534 aaPredicted RBP27.27■■□□□ 1.96
CDPF1-201ENST00000314567 UPF3AQ9H1J1 476 aaKnown RBP27.27■■□□□ 1.96
CDPF1-201ENST00000314567 PAXBP1Q9Y5B6 917 aa27.27■■□□□ 1.96
CDPF1-201ENST00000314567 PURAQ00577 322 aaKnown RBP27.26■■□□□ 1.95
CDPF1-201ENST00000314567 KSR1Q8IVT5 923 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 REXO1L1PQ8IX06 675 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 LRRC71Q8N4P6 559 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 EDEM3Q9BZQ6 932 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 ST6GALNAC4Q9H4F1 302 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 ARMCX3Q9UH62 379 aaPredicted RBP27.26■■□□□ 1.95
CDPF1-201ENST00000314567 KAT6AQ92794 2004 aa27.26■■□□□ 1.95
CDPF1-201ENST00000314567 CCDC175P0C221 793 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 EPB41P11171 864 aaKnown RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 ZC2HC1CQ53FD0 456 aaPredicted RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 CXCL17Q6UXB2 119 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 TOGARAM2Q6ZUX3 1019 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 SLC7A3Q8WY07 619 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 KIFC3Q9BVG8 833 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 POLR3FQ9H1D9 316 aaPredicted RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 SUGCTQ9HAC7 445 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 K7ENM7 598 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 HSPA1AP0DMV8 641 aaKnown RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 HSPA1BP0DMV9 641 aaKnown RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 KCNA1Q09470 495 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 BRDTQ58F21 947 aaPredicted RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 RAD9BQ6WBX8 426 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 MKNK1Q9BUB5 465 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 GBP3Q9H0R5 595 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 TMEM206Q9H813 350 aa27.25■■□□□ 1.95
CDPF1-201ENST00000314567 HMX1Q9NP08 348 aaPredicted RBP27.25■■□□□ 1.95
CDPF1-201ENST00000314567 KLK7P49862 253 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 PEX3P56589 373 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 MKRN4PQ13434 485 aaPredicted RBP27.24■■□□□ 1.95
CDPF1-201ENST00000314567 MYBPC2Q14324 1141 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 MFSD10Q14728 455 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 MEA1Q16626 185 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 UNC93B1Q9H1C4 597 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 IKZF4Q9H2S9 585 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 SETD4Q9NVD3 440 aa27.24■■□□□ 1.95
CDPF1-201ENST00000314567 RBAK-RBAKDNI3L0D1 243 aa27.23■■□□□ 1.95
CDPF1-201ENST00000314567 MAFO75444 373 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms