RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 MINDY3Q9H8M7 445 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 KMT5AQ9NQR1 393 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 SQORQ9Y6N5 450 aa13.96□□□□□ -0.17
CHMP2A-201ENST00000312547 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
CHMP2A-201ENST00000312547 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 SLC16A4O15374 487 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 TIMP1P01033 207 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 SCP2P22307 547 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 CYP2C18P33260 490 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 EFNA5P52803 228 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 SMTNP53814 917 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 PSMD2Q13200 908 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 FBXO47Q5MNV8 452 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 EPM2AIP1Q7L775 607 aaPredicted RBP13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 SRGAP1Q7Z6B7 1085 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 C7orf61Q8IZ16 206 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 PPP1R12CQ9BZL4 782 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 C2orf40Q9H1Z8 148 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 FZD8Q9H461 694 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 MAN1B1Q9UKM7 699 aa13.95□□□□□ -0.18
CHMP2A-201ENST00000312547 H0YCG3 227 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 EVI5O60447 810 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 PARNO95453 639 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 BMP6P22004 513 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 CASP5P51878 434 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 GTF2BQ00403 316 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 STK4Q13043 487 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 LPIN1Q14693 890 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 AMHR2Q16671 573 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 CAVIN1Q6NZI2 390 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 ZBTB8OSQ8IWT0 167 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 GLIS3Q8NEA6 775 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 AGO3Q9H9G7 860 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 MRPL44Q9H9J2 332 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 PRDM5Q9NQX1 630 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 TBC1D7Q9P0N9 293 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 GINS2Q9Y248 185 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 ALPK3Q96L96 1907 aa13.94□□□□□ -0.18
CHMP2A-201ENST00000312547 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 DENND3A2RUS2 1198 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 K7ENM7 598 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 NBNO60934 754 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 CSDE1O75534 798 aaKnown RBP13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 CXCL10P02778 98 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 MYBP10242 640 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 GHRP10912 638 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 RAG1P15918 1043 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 CCL23P55773 120 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 ALCAMQ13740 583 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 MORC3Q14149 939 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 FAM187BQ17R55 369 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 BMT2Q1RMZ1 405 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 ERVK-5Q9HDB9 667 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 SLC39A2Q9NP94 309 aa13.93□□□□□ -0.18
CHMP2A-201ENST00000312547 EVPLQ92817 2033 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 RBAK-RBAKDNI3L0D1 243 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 K7ERI5 159 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 ACKR2O00590 384 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 GCNT3O95395 438 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 EDN1P05305 212 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 ABCD1P33897 745 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 RFC2P35250 354 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 MAPK6Q16659 721 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 COBLL1Q53SF7 1204 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 MAP4K3Q8IVH8 894 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 ZNF507Q8TCN5 953 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 SCFD1Q8WVM8 642 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 DPF3Q92784 378 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms