RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 GOLGA6L10A0A0M3HER8 536 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 PHF2O75151 1096 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 KRT18P05783 430 aaKnown RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 ATP2B4P23634 1241 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 CYP3A7P24462 503 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 STAT3P40763 770 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 RPL21P46778 160 aaKnown RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 PSMC6P62333 389 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 CNGA2Q16280 664 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 ZNF568Q3ZCX4 644 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 MFSD5Q6N075 450 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 TBC1D1Q86TI0 1168 aaPredicted RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 CATSPER3Q86XQ3 398 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 ZDHHC14Q8IZN3 488 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 SYT2Q8N9I0 419 aaPredicted RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 EPS8L3Q8TE67 593 aaKnown RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 AGAP11Q8TF27 550 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 NSMCE1Q8WV22 266 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 GPR101Q96P66 508 aaPredicted RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 NAP1L4Q99733 375 aaKnown RBP9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 GOPCQ9HD26 462 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 ZMYM2Q9UBW7 1377 aa9.17□□□□□ -0.94
UBQLN3-201ENST00000311659 MARCH6O60337 910 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 UBOX5O94941 541 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 RPSAP08865 295 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CLTAP09496 248 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ALAS1P13196 640 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 KCNJ2P63252 427 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CLUL1Q15846 466 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 EP400NLQ6ZTU2 488 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ADAT2Q7Z6V5 191 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 PRELID2Q8N945 189 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TBC1D22AQ8WUA7 517 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CRYGNQ8WXF5 182 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 RSRC1Q96IZ7 334 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ZHX3Q9H4I2 956 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 GPCPD1Q9NPB8 672 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 POLLQ9UGP5 575 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ZNFX1Q9P2E3 1918 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TGFB1I1O43294 461 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 RIPK2O43353 540 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ANP32DO95626 131 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 SPATA31C1P0DKV0 1188 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CTNNA2P26232 953 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CHRNA3P32297 505 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 GBP1P32455 592 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 GABPAQ06546 454 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 KCNA1Q09470 495 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 PRPF4BQ13523 1007 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TCERG1LQ5VWI1 586 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 AADACL2Q6P093 401 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TTC27Q6P3X3 843 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 PNMA8AQ86V59 439 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 PALB2Q86YC2 1186 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 KIRREL3Q8IZU9 778 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 ETNPPLQ8TBG4 499 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 CTNNBL1Q8WYA6 563 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 STK33Q9BYT3 514 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TRIM6Q9C030 488 aaPredicted RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 NSRP1Q9H0G5 558 aaKnown RBP9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 THAP2Q9H0W7 228 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 BCAS3Q9H6U6 928 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 PSTPIP2Q9H939 334 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 TAS2R14Q9NYV8 317 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 RASAL2Q9UJF2 1139 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 L3MBTL1Q9Y468 752 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 SYNGAP1Q96PV0 1343 aa9.16□□□□□ -0.94
UBQLN3-201ENST00000311659 SMIM23A6NLE4 172 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 RSPH10B2B2RC85 870 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 ZBTB5O15062 677 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 VIMP08670 466 aaKnown RBP9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 RSPH10BP0C881 870 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 HSPA6P17066 643 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 ABCB4P21439 1286 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 RPL13P26373 211 aaKnown RBP9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 RPA1P27694 616 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 POLD1P28340 1107 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 PDE6CP51160 858 aa9.15□□□□□ -0.94
UBQLN3-201ENST00000311659 ALDH5A1P51649 535 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms