RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 HGSNATQ68CP4 663 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 NTPCRQ9BSD7 190 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 USP20Q9Y2K6 914 aa24.5■■□□□ 1.51
PDLIM2-202ENST00000308354 KRT86O43790 486 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 CNGA1P29973 690 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 KIF11P52732 1056 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 CCNA1P78396 465 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 TDRD12Q587J7 1177 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 CELF3Q5SZQ8 465 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 MAP4K3Q8IVH8 894 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 SPIRE2Q8WWL2 714 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 AJAP1Q9UKB5 411 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 DUSP10Q9Y6W6 482 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 SPDYE4A6NLX3 237 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 NOP56O00567 594 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 TXNP10599 105 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 SPA17Q15506 151 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 ARMCX2Q7L311 632 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 ANKRD23Q86SG2 305 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 XXYLT1Q8NBI6 393 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 GLG1Q92896 1179 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 SAAL1Q96ER3 474 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 GPR20Q99678 358 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 C17orf75Q9HAS0 396 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 SIX2Q9NPC8 291 aa24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 PUF60Q9UHX1 559 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-202ENST00000308354 AKR1B10O60218 316 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 DHX37Q8IY37 1157 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 SLC17A8Q8NDX2 589 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 IFT74Q96LB3 600 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 SPATA33Q96N06 139 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 CEP89Q96ST8 783 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 DHX33Q9H6R0 707 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 PLCB1Q9NQ66 1216 aa24.48■■□□□ 1.51
PDLIM2-202ENST00000308354 VAV2P52735 878 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 MYBPC2Q14324 1141 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 GJC2Q5T442 439 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 FAM160B1Q5W0V3 765 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 CCDC62Q6P9F0 684 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 SRGAP1Q7Z6B7 1085 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 ASAP3Q8TDY4 903 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 SLC7A3Q8WY07 619 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 NIFKQ9BYG3 293 aaKnown RBP24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 AZI2Q9H6S1 392 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 SLC45A1Q9Y2W3 748 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 ENC1O14682 589 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 CLCN6P51797 869 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 CHMP4BP1P59074 171 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 AMPD2Q01433 879 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 GFPT1Q06210 699 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 SLC39A4Q6P5W5 647 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 TAS1R3Q7RTX0 852 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 C12orf56Q8IXR9 622 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 GOLGA1Q92805 767 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 IFIH1Q9BYX4 1025 aaKnown RBP24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 ZNF446Q9NWS9 450 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 EXOC7Q9UPT5 735 aa24.47■■□□□ 1.51
PDLIM2-202ENST00000308354 KRT13P13646 458 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 TUBB2AQ13885 445 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 PPP2R5AQ15172 486 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 KCNV1Q6PIU1 500 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 CBWD2Q8IUF1 395 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 MORC4Q8TE76 937 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 SPAG5Q96R06 1193 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 TUBB2BQ9BVA1 445 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 NRBP2Q9NSY0 501 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 MACROD2A1Z1Q3 448 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 HUNKP57058 714 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 RTP1P59025 263 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 ZNF792Q3KQV3 632 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 SLC9C1Q4G0N8 1177 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 EHBP1Q8NDI1 1231 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 PLEKHO2Q8TD55 490 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 AFAP1L1Q8TED9 768 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 UBE2Q2Q8WVN8 375 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 PCDHA13Q9Y5I0 950 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 MYH10P35580 1976 aa24.46■■□□□ 1.51
PDLIM2-202ENST00000308354 ASB14A6NK59 587 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 HNRNPDLO14979 420 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 ADRB2P07550 413 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 PNMA6AP0CW24 399 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 GLRA2P23416 452 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 VAMP7P51809 220 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 KIF5AQ12840 1032 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 DRP2Q13474 957 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 INTS8Q75QN2 995 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 CEP112Q8N8E3 955 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 NUCKS1Q9H1E3 243 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 HDAC6Q9UBN7 1215 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 IVNS1ABPQ9Y6Y0 642 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 GTPBP10A4D1E9 387 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 LCA5LO95447 670 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 ZBTB48P10074 688 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 GCLCP48506 637 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 PPP3CAQ08209 521 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 TARBP2Q15633 366 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 SYN2Q92777 582 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 BICD1Q96G01 975 aa24.45■■□□□ 1.5
PDLIM2-202ENST00000308354 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms