RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PPME1Q9Y570 386 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 KAT6AQ92794 2004 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ADGRA3Q8IWK6 1321 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 CCDC169A6NNP5 214 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MAPK13O15264 365 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 STRNO43815 780 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ABCD1P33897 745 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 RFC5P40937 340 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 STAT5BP51692 787 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 GPR20Q99678 358 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 PTPN18Q99952 460 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 CRACR2AQ9BSW2 395 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 POLR3FQ9H1D9 316 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MLXIPQ9HAP2 919 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 KCNG1Q9UIX4 513 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 TBX20Q9UMR3 447 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MYH10P35580 1976 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 MGAMO43451 1857 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 EIF3CLB5ME19 914 aaKnown RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 TISP43B9A030 160 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 H0YCG3 227 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 EXOC3O60645 756 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 UQCRHP07919 91 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 SCP2P22307 547 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 PON1P27169 355 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 ADORA2AP29274 412 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 CYLC1P35663 651 aaPredicted RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 POLGP54098 1239 aaPredicted RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 BFSP1Q12934 665 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 EXOC3L4Q17RC7 722 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 ZNF662Q6ZS27 426 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 EIF3CQ99613 913 aaKnown RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 NRBP2Q9NSY0 501 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
TRIM40-205ENST00000307859 DIS3Q9Y2L1 958 aaKnown RBP12.98□□□□□ -0.33
TRIM40-205ENST00000307859 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 A0A1W2PPC1 479 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 FANCGO15287 622 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 ARL2P36404 184 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 ARHGAP25P42331 645 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 POLR2FP61218 127 aaKnown RBP12.97□□□□□ -0.33
TRIM40-205ENST00000307859 GRB14Q14449 540 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 HSDL1Q3SXM5 330 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 GBP6Q6ZN66 633 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 IFT74Q96LB3 600 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 SIX2Q9NPC8 291 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
TRIM40-205ENST00000307859 CEP290O15078 2479 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 RBM47A0AV96 593 aaKnown RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 LCA5LO95447 670 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 SLC9A1P19634 815 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 NAMPTP43490 491 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 FMO5P49326 533 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 KLHDC7AQ5VTJ3 777 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 MAMDC4Q6UXC1 1216 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
TRIM40-205ENST00000307859 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 LZTFL1Q9NQ48 299 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 GCNT4Q9P109 453 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
TRIM40-205ENST00000307859 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms