RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PPP2R5EQ16537 467 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 NFIL3Q16649 462 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 DENND2CQ68D51 928 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 PHLDB3Q6NSJ2 640 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 RDH13Q8NBN7 331 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 CHMP6Q96FZ7 201 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 SELENOSQ9BQE4 189 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 WDR18Q9BV38 432 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 HAUS2Q9NVX0 235 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 ALG6Q9Y672 507 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 TMEM110-MUSTN1A8MSY1 372 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 NUDT17P0C025 328 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 CCDC172P0C7W6 258 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 CHN1P15882 459 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 UBAP2Q5T6F2 1119 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 LRCH2Q5VUJ6 765 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 OTOP1Q7RTM1 612 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 ZNF720Q7Z2F6 126 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 GPATCH11Q8N954 259 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 MYCBPQ99417 103 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 SPATA31A6Q5VVP1 1343 aa14.31□□□□□ -0.12
SLC28A1-201ENST00000286749 CHUKO15111 745 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 CYP3A4P08684 503 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 SCTRP47872 440 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 KIF22Q14807 665 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 SH3BP5LQ7L8J4 393 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 KRT35Q92764 455 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 AGPAT1Q99943 283 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 AZI2Q9H6S1 392 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 CTTNBP2NLQ9P2B4 639 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 RASAL2Q9UJF2 1139 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 MMEP08473 750 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 SF3A3Q12874 501 aaKnown RBP eCLIP14.3□□□□□ -0.123e-8■■■■■ 54.4
SLC28A1-201ENST00000286749 PPP2R5AQ15172 486 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 ODR4Q5SWX8 454 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 BANK1Q8NDB2 785 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 UHMK1Q8TAS1 419 aaKnown RBP14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 CENPTQ96BT3 561 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 A1CFQ9NQ94 594 aaKnown RBP14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 GRHL1Q9NZI5 618 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
SLC28A1-201ENST00000286749 G3V3G9 751 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 EXOC3O60645 756 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 PHF2O75151 1096 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 MAP2K2P36507 400 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 PTGIRP43119 386 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 GSCP56915 257 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 BFSP1Q12934 665 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 LACTB2Q53H82 288 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 FUKQ8N0W3 1084 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 GMCL1P1Q8NEA9 526 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 CCT6BQ92526 530 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 FAM198AQ9UFP1 575 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 CHORDC1Q9UHD1 332 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 SYNGAP1Q96PV0 1343 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 FTLP02792 175 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 BMP3P12645 472 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 RPL21P46778 160 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 UBXN2AP68543 259 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 IFI35P80217 286 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 TMEM179Q6ZVK1 233 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 KIAA0825Q8IV33 1275 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 RHOT2Q8IXI1 618 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 SPICE1Q8N0Z3 855 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 PGM2Q96G03 612 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 ADAM7Q9H2U9 754 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 SEMA4AQ9H3S1 761 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 WRAP73Q9P2S5 460 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 UBE4BO95155 1302 aa14.29□□□□□ -0.12
SLC28A1-201ENST00000286749 CCDC169A6NNP5 214 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 RGS16O15492 202 aaPredicted RBP14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 PSMD10O75832 226 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 MMP13P45452 471 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 RBM5P52756 815 aaKnown RBP eCLIP14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 DRG2P55039 364 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 CLUL1Q15846 466 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 ABCB5Q2M3G0 1257 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 C11orf63Q6NUN7 778 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
SLC28A1-201ENST00000286749 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms