RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 OFD1O75665 1012 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 ALDH1A1P00352 501 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
TPM1-201ENST00000267996 ZNF484Q5JVG2 852 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 CYP4F22Q6NT55 531 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 XXYLT1Q8NBI6 393 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 TCP11Q8WWU5 503 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 APBA2Q99767 749 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 RNPEPQ9H4A4 650 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 TMEM134Q9H6X4 195 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 ADCY6O43306 1168 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 NOL4O94818 638 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 PIGRP01833 764 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 CTGFP29279 349 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 HNRNPH3P31942 346 aaKnown RBP17.89■□□□□ 0.45
TPM1-201ENST00000267996 TNFAIP2Q03169 654 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 NOGQ13253 232 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 DRP2Q13474 957 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 CYP26C1Q6V0L0 522 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 RAD9BQ6WBX8 426 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 NEK11Q8NG66 645 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 FBXL18Q96ME1 805 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.45
TPM1-201ENST00000267996 TRPC6Q9Y210 931 aa17.89■□□□□ 0.45
TPM1-201ENST00000267996 GNEQ9Y223 722 aaKnown RBP17.89■□□□□ 0.45
TPM1-201ENST00000267996 SOWAHDA6NJG2 315 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 TNPO2O14787 897 aaKnown RBP17.88■□□□□ 0.45
TPM1-201ENST00000267996 ADCY3O60266 1144 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 MMP3P08254 477 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 GARTP22102 1010 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 CDK17Q00537 523 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 CAPSQ13938 189 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 CCL14Q16627 93 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 DCAF17Q5H9S7 520 aaPredicted RBP17.88■□□□□ 0.45
TPM1-201ENST00000267996 PRAMEF19Q5SWL8 479 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 INTS8Q75QN2 995 aaKnown RBP17.88■□□□□ 0.45
TPM1-201ENST00000267996 ZNF397Q8NF99 534 aaPredicted RBP17.88■□□□□ 0.45
TPM1-201ENST00000267996 OR6J1Q8NGC5 347 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 DEPTORQ8TB45 409 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 PRPF31Q8WWY3 499 aaKnown RBP17.88■□□□□ 0.45
TPM1-201ENST00000267996 BAP1Q92560 729 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 PCIF1Q9H4Z3 704 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 PLCB1Q9NQ66 1216 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 STYXL1Q9Y6J8 313 aa17.88■□□□□ 0.45
TPM1-201ENST00000267996 MGAMO43451 1857 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 CCP110O43303 1012 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 CYP2B6P20813 491 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 BFSP1Q12934 665 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 MXD4Q14582 209 aaPredicted RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 MTF1Q14872 753 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 TCERG1LQ5VWI1 586 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 PSPC1Q8WXF1 523 aaKnown RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 CRACR2AQ9BSW2 395 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 LSM14BQ9BX40 385 aaKnown RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 GANQ9H2C0 597 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 TRMT1Q9NXH9 659 aaKnown RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 CEP72Q9P209 647 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 COL1A2P08123 1366 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 LRRIQ4A6NIV6 560 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 ECM2O94769 699 aaPredicted RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 C22orf31O95567 290 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 INSRRP14616 1297 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 CYP2C19P33261 490 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 TOGARAM2Q6ZUX3 1019 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 REM2Q8IYK8 340 aaPredicted RBP17.87■□□□□ 0.45
TPM1-201ENST00000267996 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 PLAGL2Q9UPG8 496 aa17.87■□□□□ 0.45
TPM1-201ENST00000267996 A6NJR5 290 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 K7ERI5 159 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 KRT13P13646 458 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 PON1P27169 355 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 FMO5P49326 533 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 EFNA5P52803 228 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 ENPEPQ07075 957 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 LAMTOR4Q0VGL1 99 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 STRN3Q13033 797 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 DGKDQ16760 1214 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 EXOC3L4Q17RC7 722 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 GBP6Q6ZN66 633 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 PHLPP2Q6ZVD8 1323 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
TPM1-201ENST00000267996 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 LRRC71Q8N4P6 559 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 LINC01465Q8N7H1 131 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 TRAPPC12Q8WVT3 735 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 CHP1Q99653 195 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
TPM1-201ENST00000267996 PPP2R2CQ9Y2T4 447 aa17.86■□□□□ 0.45
TPM1-201ENST00000267996 H3BRB1 525 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 HNRNPDLO14979 420 aaKnown RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 MAGEB2O15479 319 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 ZNF286BP0CG31 522 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 VAMP7P51809 220 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms