RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SLITRK6Q9H5Y7 841 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ABHD10Q9NUJ1 306 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 A2ML1A8K2U0 1454 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MIF4GDA9UHW6 222 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 NBPF26B4DH59 902 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GPC4O75487 556 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RFX1P22670 979 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RGS2P41220 211 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 YARSP54577 528 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 RSBN1LQ6PCB5 846 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 TRAF7Q6Q0C0 670 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RSRC2Q7L4I2 434 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 HORMAD1Q86X24 394 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PPWD1Q96BP3 646 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 ASCC2Q9H1I8 757 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 KRT82Q9NSB4 513 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 DDX20Q9UHI6 824 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 ANAPC5Q9UJX4 755 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 DSEQ9UL01 958 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 NOC2LQ9Y3T9 749 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 ABCA8O94911 1581 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 E9PCH4 1651 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GNPATO15228 680 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MOCS3O95396 460 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MMP1P03956 469 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 SPTBP11277 2137 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 EEF1B2P24534 225 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 ADD2P35612 726 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PIK3CAP42336 1068 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 SURF1Q15526 300 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 WDR93Q6P2C0 686 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PCDHB4Q9Y5E5 795 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 MAP3K15Q6ZN16 1313 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ZC3H13Q5T200 1668 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 GUCY1B2O75343 617 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TNFAIP1Q13829 316 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 TRIM33Q9UPN9 1127 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TARBP1Q13395 1621 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 ANKARQ7Z5J8 1434 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MYO5BQ9ULV0 1848 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 PLS3P13797 630 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 CNGA3Q16281 694 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 CEP78Q5JTW2 689 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MAPKAPK5Q8IW41 473 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 GPKOWQ92917 476 aaPredicted RBP eCLIP6.06□□□□□ -1.44
VCAN-201ENST00000265077 ADPGKQ9BRR6 497 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 SAMSN1Q9NSI8 373 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 TJP3O95049 919 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ACSL3O95573 720 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 CCNI2Q6ZMN8 369 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 NCAPG2Q86XI2 1143 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ZNF232Q9UNY5 417 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 NUP205Q92621 2012 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 A6NJR5 290 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MAP2K7O14733 419 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TBC1D12O60347 775 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 FGGP02679 453 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ZCCHC18P0CG32 403 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 DLATP10515 647 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 PLCG1P19174 1290 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 SEC24CP53992 1094 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TMED2Q15363 201 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ODR4Q5SWX8 454 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 SYT2Q8N9I0 419 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 RNF169Q8NCN4 708 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TEKT3Q9BXF9 490 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 L1RE1Q9UN81 338 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 RTTNQ86VV8 2226 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MT-ND3P03897 115 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MAP4P27816 1152 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 GGA2Q9UJY4 613 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TTLL3Q9Y4R7 772 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 GGPS1O95749 300 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 BLMHQ13867 455 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ARHGEF16Q5VV41 709 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 CMTR1Q8N1G2 835 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 AMNQ9BXJ7 453 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 OCM2P0CE71 109 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 OCMP0CE72 109 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 HBS1LQ9Y450 684 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 ZBBXA8MT70 800 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 PHF20L1A8MW92 1017 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TTLL1O95922 423 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 EPM2AIP1Q7L775 607 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 MB21D1Q8N884 522 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MAD1L1Q9Y6D9 718 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 MED7O43513 233 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 FLT3P36888 993 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 ELF3P78545 371 aaPredicted RBP6.06□□□□□ -1.44
VCAN-201ENST00000265077 UNC5CLQ8IV45 518 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 TERB1Q8NA31 727 aa6.06□□□□□ -1.44
VCAN-201ENST00000265077 HDAC11Q96DB2 347 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms