RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RTP1P59025 263 aa30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 MLKLQ8NB16 471 aa30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 CDHR5Q9HBB8 845 aa30.26■■■□□ 2.43
SMARCD3-201ENST00000262188 TRIM49BA6NDI0 452 aa30.25■■■□□ 2.43
SMARCD3-201ENST00000262188 KIZQ2M2Z5 673 aa30.25■■■□□ 2.43
SMARCD3-201ENST00000262188 TMEM106CQ9BVX2 250 aa30.25■■■□□ 2.43
SMARCD3-201ENST00000262188 SMIM35A0A1B0GVV1 85 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 B4GALT4O60513 344 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 NLRP11P59045 1033 aaKnown RBP30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 MYOCDQ8IZQ8 938 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 SLC43A3Q8NBI5 491 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 A0A087WZ62 844 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 DENND3A2RUS2 1198 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 ARVCFO00192 962 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 NAMPTP43490 491 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 TAS1R3Q7RTX0 852 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 DEPTORQ8TB45 409 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 SPIRE2Q8WWL2 714 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 FDXACB1Q9BRP7 624 aaPredicted RBP30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 C17orf75Q9HAS0 396 aa30.24■■■□□ 2.43
SMARCD3-201ENST00000262188 PPP1R37O75864 691 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 SMTNP53814 917 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 MXD4Q14582 209 aaPredicted RBP30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 NELFBQ8WX92 580 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 NTPCRQ9BSD7 190 aaKnown RBP30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 STRA6Q9BX79 667 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 SEMA6BQ9H3T3 888 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 MINDY3Q9H8M7 445 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 EDN1P05305 212 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 ZNF165P49910 485 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 SERINC5Q86VE9 423 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 PAWRQ96IZ0 340 aaKnown RBP30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 RBSNQ9H1K0 784 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 CBX8Q9HC52 389 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 ARHGAP28Q9P2N2 729 aa30.23■■■□□ 2.43
SMARCD3-201ENST00000262188 TISP43B9A030 160 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 GPC3P51654 580 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 DNTTIP2Q5QJE6 756 aaKnown RBP30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 NLRP7Q8WX94 980 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 DHX38Q92620 1227 aaKnown RBP30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 EEF2KMTQ96G04 330 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 IFT122Q9HBG6 1241 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 NOD1Q9Y239 953 aa30.22■■■□□ 2.43
SMARCD3-201ENST00000262188 CTSHP09668 335 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 MAPTP10636 758 aaKnown RBP30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 PPP2R5AQ15172 486 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 LUZP1Q86V48 1076 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 GUF1Q8N442 669 aaKnown RBP30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 AOPEPQ8N6M6 819 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 SCLT1Q96NL6 688 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 ZMYM2Q9UBW7 1377 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 EN2P19622 333 aaPredicted RBP30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 ZNF507Q8TCN5 953 aa30.21■■■□□ 2.43
SMARCD3-201ENST00000262188 TTLL13PA6NNM8 815 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 GPR32O75388 356 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 IQCF3P0C7M6 154 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 CDK7P50613 346 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 GTF2BQ00403 316 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 OSMRQ99650 979 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 ADAMTS10Q9H324 1103 aa30.2■■■□□ 2.43
SMARCD3-201ENST00000262188 COL6A1P12109 1028 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 FGFR4P22455 802 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 PAK1Q13153 545 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 TBX20Q9UMR3 447 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 PQBP1O60828 265 aaKnown RBP30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 COL13A1Q5TAT6 717 aaPredicted RBP30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 ANKRD40Q6AI12 368 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 SLC39A5Q6ZMH5 540 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 DHX40Q8IX18 779 aaKnown RBP30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 KCTD10Q9H3F6 313 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 PCDHB13Q9Y5F0 798 aa30.19■■■□□ 2.42
SMARCD3-201ENST00000262188 PSMA7O14818 248 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 PTPN11Q06124 597 aaPredicted RBP30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 STIM1Q13586 685 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 TFDP1Q14186 410 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 COBLL1Q53SF7 1204 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 HSP90AA4PQ58FG1 418 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 CDCA2Q69YH5 1023 aaPredicted RBP30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 TAF2Q6P1X5 1199 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 DACH1Q9UI36 760 aa30.18■■■□□ 2.42
SMARCD3-201ENST00000262188 EIF3DO15371 548 aaKnown RBP eCLIP30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 ASAP2O43150 1006 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 THPOP40225 353 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 PTENP60484 403 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 IQCB1Q15051 598 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 KNOP1Q1ED39 458 aaKnown RBP30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 BMT2Q1RMZ1 405 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 TMEM40Q8WWA1 233 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 P2RX5Q93086 422 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 OSBPL7Q9BZF2 842 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 ST6GALNAC4Q9H4F1 302 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 INO80B-WBP1J3KQ70 363 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 GABPB1Q06547 395 aaPredicted RBP30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 FAM126BQ8IXS8 530 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 INO80BQ9C086 356 aaPredicted RBP30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 PCDH10Q9P2E7 1040 aa30.17■■■□□ 2.42
SMARCD3-201ENST00000262188 K7ERI5 159 aa30.16■■■□□ 2.42
SMARCD3-201ENST00000262188 TGFB1I1O43294 461 aa30.16■■■□□ 2.42
SMARCD3-201ENST00000262188 FAM200AQ8TCP9 573 aa30.16■■■□□ 2.42
SMARCD3-201ENST00000262188 DHTKD1Q96HY7 919 aaPredicted RBP30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms