RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ARHGAP26Q9UNA1 814 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SNUPNO95149 360 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 GYPCP04921 128 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRPC1P48995 793 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 KLK7P49862 253 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 HIC1Q14526 733 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 PRPSAP1Q14558 356 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 RARS2Q5T160 578 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ACBD5Q5T8D3 534 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM67Q6ZTA4 783 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 STX18Q9P2W9 335 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SNX5Q9Y5X3 404 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 CRB1P82279 1406 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 A0A1W2PQC6 194 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEB3A0JP26 581 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTECB2RU33 542 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 HSPA8P11142 646 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ARL4CP56559 192 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 BYSLQ13895 437 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 RFX7Q2KHR2 1363 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 FSCBQ5H9T9 825 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 POTEBQ6S5H4 581 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SGMS1Q86VZ5 419 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 DGKHQ86XP1 1220 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 CATSPER3Q86XQ3 398 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ATP6V1E2Q96A05 226 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PPP1R36Q96LQ0 422 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 MRPL47Q9HD33 250 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 XDHP47989 1333 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 F5H423 210 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 H0YIN7 160 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 CD58P19256 250 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PRAMEP78395 509 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 BZW1Q7L1Q6 419 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 RAB44Q7Z6P3 723 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 AGGF1Q8N302 714 aaeCLIP10.38□□□□□ -0.754e-10■■■■□ 25.4
CTDSPL2-201ENST00000260327 ANO3Q9BYT9 981 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PNMA6FA0A0J9YX94 578 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 CYLC2Q14093 348 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 EAPPQ56P03 285 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 GRAMD1AQ96CP6 724 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 FUCA2Q9BTY2 467 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ADCY3O60266 1144 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZCCHC18P0CG32 403 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 ATP6V1B1P15313 513 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 DPYDQ12882 1025 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PDIA2Q13087 525 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L6PQ6QN14 398 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 FBXL13Q8NEE6 735 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 NEO1Q92859 1461 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 XPO1O14980 1071 aaKnown RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 RAD51CO43502 376 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 NR3C1P04150 777 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 NR1H3Q13133 447 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 CDC37Q16543 378 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 HIC2Q96JB3 615 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 VPS11Q9H270 941 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 PPIP5K2O43314 1243 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 DAB1O75553 588 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 KRT75O95678 551 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SLITRK6Q9H5Y7 841 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
CTDSPL2-201ENST00000260327 SCTRP47872 440 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 C4orf50Q6ZRC1 276 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 TMEM206Q9H813 350 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CNOT8Q9UFF9 292 aaKnown RBP10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 UNC13BO14795 1591 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 E2F6O75461 281 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 AGTP01019 485 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 SLC4A1P02730 911 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 KCNA4P22459 653 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 CHRNA3P32297 505 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 GCLMP48507 274 aa10.37□□□□□ -0.75
CTDSPL2-201ENST00000260327 LRIG3Q6UXM1 1119 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms