RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MYOGP15173 224 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 KRT85P78386 507 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 DSC3Q14574 896 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 CATSPER4Q7RTX7 472 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-201ENST00000260130 LRRC15Q8TF66 581 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 UBE2Q2Q8WVN8 375 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 RAD54LQ92698 747 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 TIFAQ96CG3 184 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 RAD9AQ99638 391 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 NFKBIZQ9BYH8 718 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 YBX2Q9Y2T7 364 aaKnown RBP18.54■□□□□ 0.56
SDCBP-201ENST00000260130 ME1P48163 572 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 SLC24A5Q71RS6 500 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 LOXHD1Q8IVV2 1947 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 TIPINQ9BVW5 301 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 CHST12Q9NRB3 414 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 C1orf112Q9NSG2 853 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 KCND2Q9NZV8 630 aa18.54■□□□□ 0.56
SDCBP-201ENST00000260130 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-201ENST00000260130 RRAGBQ5VZM2 374 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 BSNDQ8WZ55 320 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 TSPY26PQ9H489 355 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 PCDHA7Q9UN72 937 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 MICAL3Q7RTP6 2002 aa18.53■□□□□ 0.56
SDCBP-201ENST00000260130 RRP9O43818 475 aaKnown RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 DHX8Q14562 1220 aaKnown RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 PPP2R5AQ15172 486 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 PCBP1Q15365 356 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 DAW1Q8N136 415 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 NKX2-4Q9H2Z4 354 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 SLC28A3Q9HAS3 691 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 INSL6Q9Y581 213 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 C9IYK1 514 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 INO80B-WBP1J3KQ70 363 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 ZNF500O60304 480 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 HIP1RO75146 1068 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 NAMPTP43490 491 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 SARSP49591 514 aaKnown RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 MCM6Q14566 821 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 ARSHQ5FYA8 562 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 SHC4Q6S5L8 630 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 CCDC73Q6ZRK6 1079 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 CRIPAKQ8N1N5 446 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 LEO1Q8WVC0 666 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-201ENST00000260130 SPATA32Q96LK8 384 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 DRC1Q96MC2 740 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 STK17AQ9UEE5 414 aa18.52■□□□□ 0.56
SDCBP-201ENST00000260130 TMEM265A0A087WTH1 108 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 STAG3L1P0CL83 205 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 FAM189BP81408 668 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-201ENST00000260130 MBTD1Q05BQ5 628 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 RAD51AP2Q09MP3 1159 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 ZNF697Q5TEC3 545 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 NPAS4Q8IUM7 802 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-201ENST00000260130 DACT1Q9NYF0 836 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 PIN4Q9Y237 131 aaKnown RBP18.51■□□□□ 0.55
SDCBP-201ENST00000260130 ERLIN2O94905 339 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 CA3P07451 260 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 TERF1P54274 439 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 MAPK7Q13164 816 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 NAALADL2Q58DX5 795 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 CDCA2Q69YH5 1023 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-201ENST00000260130 GPBP1Q86WP2 473 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 TMEM87AQ8NBN3 555 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 YME1L1Q96TA2 773 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 SCAND2PQ9GZW5 306 aaPredicted RBP18.51■□□□□ 0.55
SDCBP-201ENST00000260130 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 AGPAT5Q9NUQ2 364 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 LRFN2Q9ULH4 789 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 PCDHB7Q9Y5E2 793 aa18.51■□□□□ 0.55
SDCBP-201ENST00000260130 SFI1A8K8P3 1242 aa18.5■□□□□ 0.55
SDCBP-201ENST00000260130 ZBTB8OSQ8IWT0 167 aa18.5■□□□□ 0.55
SDCBP-201ENST00000260130 DEPTORQ8TB45 409 aa18.5■□□□□ 0.55
SDCBP-201ENST00000260130 C17orf75Q9HAS0 396 aa18.5■□□□□ 0.55
SDCBP-201ENST00000260130 A0A087X0B3 334 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 NPHP3-ACAD11A0A0J9YXS1 232 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 LCHNA4D1U4 455 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 IBSPP21815 317 aaPredicted RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 HOXA11P31270 313 aaPredicted RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 STAT6P42226 847 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 PEX3P56589 373 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 NCBP1Q09161 790 aaKnown RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 HSP90AA2PQ14568 343 aaPredicted RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 DEFB123Q8N688 67 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 PDILTQ8N807 584 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 TTYH1Q9H313 450 aaPredicted RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 SEMA6BQ9H3T3 888 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 ZNF576Q9H609 170 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 ZKSCAN5Q9Y2L8 839 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 PTPRSQ13332 1948 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 CHD9Q3L8U1 2897 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 A0A0U1RQF3 1178 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms