RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CD4P01730 458 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 FKBP3Q00688 224 aaKnown RBP19.19■□□□□ 0.66
SRSF1-201ENST00000258962 KCNA1Q09470 495 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 KIAA0753Q2KHM9 967 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 ZC2HC1CQ53FD0 456 aaPredicted RBP19.19■□□□□ 0.66
SRSF1-201ENST00000258962 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 ZNF720Q7Z2F6 126 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 CCDC150Q8NCX0 1101 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 CEP170P1Q96L14 293 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 TUBGCP2Q9BSJ2 902 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 GPRC5CQ9NQ84 441 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 SEPT9Q9UHD8 586 aaPredicted RBP19.19■□□□□ 0.66
SRSF1-201ENST00000258962 TRAF3IP3Q9Y228 551 aa19.19■□□□□ 0.66
SRSF1-201ENST00000258962 DNAH12Q6ZR08 3092 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 H3BRB1 525 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 B4GALT4O60513 344 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 FGFR1OPO95684 399 aaKnown RBP19.18■□□□□ 0.66
SRSF1-201ENST00000258962 F2P00734 622 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 OATP04181 439 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 LGALS2P05162 132 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 EDRF1Q3B7T1 1238 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 MIIPQ5JXC2 388 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 CEP63Q96MT8 703 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 C16orf70Q9BSU1 422 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 TUT1Q9H6E5 874 aaKnown RBP19.18■□□□□ 0.66
SRSF1-201ENST00000258962 CYP26B1Q9NR63 512 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 ZNF215Q9UL58 517 aaPredicted RBP19.18■□□□□ 0.66
SRSF1-201ENST00000258962 NOD1Q9Y239 953 aa19.18■□□□□ 0.66
SRSF1-201ENST00000258962 ITIH6Q6UXX5 1313 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 SCN10AQ9Y5Y9 1956 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 PDXKO00764 312 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 MAPTP10636 758 aaKnown RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 PLS3P13797 630 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 TCF7P36402 384 aaPredicted RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 MTIF2P46199 727 aaKnown RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 CCZ1BP86790 482 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 CCZ1P86791 482 aaPredicted RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 KSR1Q8IVT5 923 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 AFAP1L1Q8TED9 768 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 PPP1R13LQ8WUF5 828 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 DRC1Q96MC2 740 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 IKZF4Q9H2S9 585 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 TRMT13Q9NUP7 481 aaKnown RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 TYW1Q9NV66 732 aaKnown RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 TBX21Q9UL17 535 aa19.17■□□□□ 0.66
SRSF1-201ENST00000258962 COLQQ9Y215 455 aaPredicted RBP19.17■□□□□ 0.66
SRSF1-201ENST00000258962 HAS3O00219 553 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 TGFB1I1O43294 461 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 CLCN1P35523 988 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 GOLGA8FQ08AF8 430 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 GOLGA8DPQ0D2H9 430 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 FAM102BQ5T8I3 360 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 BADQ92934 168 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 GDF15Q99988 308 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 UBE2OQ9C0C9 1292 aaKnown RBP19.16■□□□□ 0.66
SRSF1-201ENST00000258962 XPNPEP1Q9NQW7 623 aa19.16■□□□□ 0.66
SRSF1-201ENST00000258962 LARSQ9P2J5 1176 aaKnown RBP19.16■□□□□ 0.66
SRSF1-201ENST00000258962 LGR5O75473 907 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 TIMP1P01033 207 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 PRKCSHP14314 528 aaPredicted RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 UBXN1Q04323 297 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 MTERF2Q49AM1 385 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 FAM160B1Q5W0V3 765 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 CEP135Q66GS9 1140 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 SESTD1Q86VW0 696 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 GLG1Q92896 1179 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 CEP89Q96ST8 783 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 HIPK3Q9H422 1215 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 AZI2Q9H6S1 392 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 HDAC6Q9UBN7 1215 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 SIP14410 1827 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 K7ENM7 598 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 CALUO43852 315 aaPredicted RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 ZNF500O60304 480 aaPredicted RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 DGAT1O75907 488 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 BMP8BP34820 402 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 STAT5BP51692 787 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 PTGISQ16647 500 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 NOC4LQ9BVI4 516 aaKnown RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 NIFKQ9BYG3 293 aaKnown RBP19.15■□□□□ 0.66
SRSF1-201ENST00000258962 PPP1R12CQ9BZL4 782 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 ST6GALNAC4Q9H4F1 302 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 SMARCAD1Q9H4L7 1026 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
SRSF1-201ENST00000258962 A0A1W2PQC6 194 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 NR2F2P24468 414 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 DNM2P50570 870 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 NCKAP1LP55160 1127 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 ADAM9Q13443 819 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 MAN2A1Q16706 1144 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 TRIM50Q86XT4 487 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 TC2NQ8N9U0 490 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 BSNDQ8WZ55 320 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 ATP6V0A4Q9HBG4 840 aa19.14■□□□□ 0.65
SRSF1-201ENST00000258962 ERAP1Q9NZ08 941 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms