RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SEL1LQ9UBV2 794 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GTPBP10A4D1E9 387 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 CLIC2O15247 247 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 RAD23BP54727 409 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ADCY1Q08828 1119 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 HIF1AQ16665 826 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 IMPG1Q17R60 797 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ENOSF1Q7L5Y1 443 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 STX19Q8N4C7 294 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 HACD3Q9P035 362 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 COPG1Q9Y678 874 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PLEKHG3A1L390 1219 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 CCDC78A2IDD5 438 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TCP11X1B4DZS4 312 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 AP3B1O00203 1094 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 HAUS5O94927 633 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 OSBPP22059 807 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 AP3B2Q13367 1082 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 RWDD4Q6NW29 188 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ALKBH5Q6P6C2 394 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 C16orf89Q6UX73 402 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 EEF2KMTQ96G04 330 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PGBD1Q96JS3 809 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PAGR1Q9BTK6 254 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GINM1Q9NU53 330 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 CHCHD3Q9NX63 227 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GTSE1Q9NYZ3 720 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TRPC5Q9UL62 973 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 H0Y626 953 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TRIM16O95361 564 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 SLC4A1P02730 911 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF18P17022 549 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 MED21Q13503 144 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GOLPH3LQ9H4A5 285 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 BATF3Q9NR55 127 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PCDHB6Q9Y5E3 794 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PSMC1P62191 440 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TRADDQ15628 312 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ELMSAN1Q6PJG2 1045 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ABI1Q8IZP0 508 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 KDM4CQ9H3R0 1056 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 MYOM1P52179 1685 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 HSPA1AP0DMV8 641 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 HSPA1BP0DMV9 641 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 NR5A1Q13285 461 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 LRRC24Q50LG9 513 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF564Q8TBZ8 553 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 CEP170P1Q96L14 293 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 KIF2CQ99661 725 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GREM2Q9H772 168 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 SMG5Q9UPR3 1016 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 UBR1Q8IWV7 1749 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GOLGA8MH3BSY2 632 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 INO80B-WBP1J3KQ70 363 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 APOL1O14791 398 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 SLC16A3O15427 465 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 KITP10721 976 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 SCNN1DP51172 638 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 NFRKBQ6P4R8 1299 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 NCAPG2Q86XI2 1143 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 FAM167AQ96KS9 214 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 EDEM3Q9BZQ6 932 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 INO80BQ9C086 356 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 AP5M1Q9H0R1 490 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF229Q9UJW7 825 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ARL2BPQ9Y2Y0 163 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 NCKAP5LQ9HCH0 1330 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 H0Y3Z8 333 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 S100A5P33763 92 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 FAM47CQ5HY64 1035 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 RAD54LQ92698 747 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ALDH8A1Q9H2A2 487 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 BLOC1S6Q9UL45 172 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 ABCE1P61221 599 aaKnown RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 MECOMQ03112 1051 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 FAM160B2Q86V87 743 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 AGGF1Q8N302 714 aaeCLIP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 RIMS1Q86UR5 1692 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 BMP3P12645 472 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 KCNA6P17658 529 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 CDH2P19022 906 aaPredicted RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 COASYQ13057 564 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 KCTD2Q14681 263 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PRMT1Q99873 361 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 IRAK4Q9NWZ3 460 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ADAM22Q9P0K1 906 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 SERPINB13Q9UIV8 391 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PAIP2BQ9ULR5 123 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 PARP4Q9UKK3 1724 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ZRANB2O95218 330 aaKnown RBP eCLIP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 CYP21A2P08686 494 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 CLEC17AQ6ZS10 378 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 FRMD5Q7Z6J6 570 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 DCPSQ96C86 337 aaKnown RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 KLHL8Q9P2G9 620 aaPredicted RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 ERVV-1B6SEH8 477 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 SRGAP2O75044 1071 aa5.09□□□□□ -1.59
RC3H1-201ENST00000258349 DEAF1O75398 565 aaPredicted RBP5.09□□□□□ -1.59
RC3H1-201ENST00000258349 MYO1DO94832 1006 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms