RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 CCHCR1Q8TD31 782 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 PGM2Q96G03 612 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 DLGAP2Q9P1A6 1054 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 KLHL14Q9P2G3 628 aa15.48■□□□□ 0.07
SDC1-201ENST00000254351 PFASO15067 1338 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L15C9J2P7 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L13C9JLJ4 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L11C9JVI0 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L18D6R9N7 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L22D6RA61 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L17D6RBQ6 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L19D6RCP7 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L20D6RJB6 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 GCNT3O95395 438 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L24Q0WX57 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 BNIP1Q12981 228 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 RIPK1Q13546 671 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 BLMHQ13867 455 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 USP17L6PQ6QN14 398 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 NSMFQ6X4W1 530 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 TAOK1Q7L7X3 1001 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 PAPOLBQ9NRJ5 636 aaKnown RBP15.47■□□□□ 0.07
SDC1-201ENST00000254351 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 GRHL1Q9NZI5 618 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 STXBP5LQ9Y2K9 1186 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 SUGT1Q9Y2Z0 365 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 KIF3CO14782 793 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 DDX3YO15523 660 aaKnown RBP15.47■□□□□ 0.07
SDC1-201ENST00000254351 EDIL3O43854 480 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 PIAS1O75925 651 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 AGTP01019 485 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 HIBADHP31937 336 aaKnown RBP15.47■□□□□ 0.07
SDC1-201ENST00000254351 RFC5P40937 340 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 ADCY2Q08462 1091 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 DNAJC3Q13217 504 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 NBPF20Q3BBV1 942 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 C11orf91Q3C1V1 193 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
SDC1-201ENST00000254351 TMEM154Q6P9G4 183 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 CENPTQ96BT3 561 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 SLCO1B3Q9NPD5 702 aa15.47■□□□□ 0.07
SDC1-201ENST00000254351 SNUPNO95149 360 aaKnown RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 DLATP10515 647 aaKnown RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 GM2AP17900 193 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 EPHB2P29323 1055 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 ADCY7P51828 1080 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 EAPPQ56P03 285 aaPredicted RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 INTS8Q75QN2 995 aaKnown RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 RASGEF1CQ8N431 466 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 CNBD1Q8NA66 436 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 FBF1Q8TES7 1133 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 FBXO41Q8TF61 875 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 UCMAQ8WVF2 138 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 ATG4AQ8WYN0 398 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 UTP4Q969X6 686 aaKnown RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 TXLNGYQ9BZA5 131 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 KCTD10Q9H3F6 313 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 ASIC3Q9UHC3 531 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 RASAL2Q9UJF2 1139 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 CORO1CQ9ULV4 474 aaPredicted RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 ALG6Q9Y672 507 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 CHKAP35790 457 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 DRAP1Q14919 205 aaPredicted RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 ANO7Q6IWH7 933 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 ECHDC2Q86YB7 292 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 PRELID2Q8N945 189 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 DAGLBQ8NCG7 672 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 HAS1Q92839 578 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 CDC42EP4Q9H3Q1 356 aaKnown RBP15.46■□□□□ 0.07
SDC1-201ENST00000254351 ETAA1Q9NY74 926 aa15.46■□□□□ 0.07
SDC1-201ENST00000254351 YY1P25490 414 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 CYP2J2P51589 502 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 SNAP25P60880 206 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 COG2Q14746 738 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 DTX3LQ8TDB6 740 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 SLC20A1Q8WUM9 679 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 TEKT4Q8WW24 435 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 PITPNM3Q9BZ71 974 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 MYLK2Q9H1R3 596 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 KCNQ5Q9NR82 932 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 ARL2BPQ9Y2Y0 163 aa15.46■□□□□ 0.06
SDC1-201ENST00000254351 MYH3P11055 1940 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 NUDT17P0C025 328 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 NEFHP12036 1026 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 TNFAIP3P21580 790 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 MTM1Q13496 603 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 CYP4F22Q6NT55 531 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 LRRD1A4D1F6 860 aa15.45■□□□□ 0.06
SDC1-201ENST00000254351 WDR91A4D1P6 747 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms