RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PRKCEQ02156 737 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 C2orf54Q08AI8 447 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 DMP1Q13316 513 aaPredicted RBP16.03■□□□□ 0.16
MBD4-201ENST00000249910 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
MBD4-201ENST00000249910 SH3D19Q5HYK7 790 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 MS4A14Q96JA4 679 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 OSBPL9Q96SU4 736 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 INTS2Q9H0H0 1204 aaKnown RBP16.03■□□□□ 0.16
MBD4-201ENST00000249910 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 VAMP7P51809 220 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 TTLL12Q14166 644 aaPredicted RBP16.03■□□□□ 0.16
MBD4-201ENST00000249910 NAB2Q15742 525 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 MTERF2Q49AM1 385 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 ABHD15Q6UXT9 468 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 DNAH12Q6ZR08 3092 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 GLYCTKQ8IVS8 523 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 GPR88Q9GZN0 384 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
MBD4-201ENST00000249910 ADRB2P07550 413 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 KRT13P13646 458 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 SMTNP53814 917 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 NCKAP1LP55160 1127 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.16
MBD4-201ENST00000249910 PPP2R5AQ15172 486 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 STXBP2Q15833 593 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 C1orf220Q5T0J3 134 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 ABCB6Q9NP58 842 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 XPNPEP1Q9NQW7 623 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 APEX2Q9UBZ4 518 aa16.02■□□□□ 0.16
MBD4-201ENST00000249910 DOCK5Q9H7D0 1870 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 CCDC151A5D8V7 595 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.15
MBD4-201ENST00000249910 DDX3XO00571 662 aaKnown RBP eCLIP16.02■□□□□ 0.153e-6■■□□□ 14.5
MBD4-201ENST00000249910 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.15
MBD4-201ENST00000249910 PSAPP07602 524 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 ATP4AP20648 1035 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 INTS8Q75QN2 995 aaKnown RBP16.02■□□□□ 0.15
MBD4-201ENST00000249910 KRT222Q8N1A0 295 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 SYT17Q9BSW7 474 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 FBXL5Q9UKA1 691 aa16.02■□□□□ 0.15
MBD4-201ENST00000249910 PGK2P07205 417 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 MAPTP10636 758 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 STAT1P42224 750 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 NOP2P46087 812 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 PLA2G4AP47712 749 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 KAT5Q92993 513 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 STK33Q9BYT3 514 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 CYP26B1Q9NR63 512 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 FAM53CQ9NYF3 392 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 SOX5P35711 763 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 PRKCIP41743 596 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 SNRNP35Q16560 246 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 SLC39A4Q6P5W5 647 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 PALB2Q86YC2 1186 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 GDAP1L1Q96MZ0 367 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 SENP7Q9BQF6 1050 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 FUT8Q9BYC5 575 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 SPATC1LQ9H0A9 340 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 TXNRD2Q9NNW7 524 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 ACP6Q9NPH0 428 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 RAB21Q9UL25 225 aa16.01■□□□□ 0.15
MBD4-201ENST00000249910 BZW2Q9Y6E2 419 aaKnown RBP16.01■□□□□ 0.15
MBD4-201ENST00000249910 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
MBD4-201ENST00000249910 MAP2K1Q02750 393 aaPredicted RBP16■□□□□ 0.15
MBD4-201ENST00000249910 KCTD19Q17RG1 926 aaPredicted RBP16■□□□□ 0.15
MBD4-201ENST00000249910 BEND6Q5SZJ8 279 aaPredicted RBP16■□□□□ 0.15
MBD4-201ENST00000249910 ARHGEF19Q8IW93 802 aa16■□□□□ 0.15
MBD4-201ENST00000249910 HDAC7Q8WUI4 952 aa16■□□□□ 0.15
MBD4-201ENST00000249910 CDHR1Q96JP9 859 aa16■□□□□ 0.15
MBD4-201ENST00000249910 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
MBD4-201ENST00000249910 YY1AP1Q9H869 796 aa16■□□□□ 0.15
MBD4-201ENST00000249910 TOPORSQ9NS56 1045 aaPredicted RBP16■□□□□ 0.15
MBD4-201ENST00000249910 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
MBD4-201ENST00000249910 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
MBD4-201ENST00000249910 HNRNPDLO14979 420 aaKnown RBP16■□□□□ 0.15
MBD4-201ENST00000249910 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
MBD4-201ENST00000249910 ALCAMQ13740 583 aa16■□□□□ 0.15
MBD4-201ENST00000249910 Q3C1V9 767 aa16■□□□□ 0.15
MBD4-201ENST00000249910 CHST13Q8NET6 341 aa16■□□□□ 0.15
MBD4-201ENST00000249910 RDM1Q8NG50 284 aa16■□□□□ 0.15
MBD4-201ENST00000249910 LNX1Q8TBB1 728 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms