RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TMEM253P0C7T8 217 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 ZNF844Q08AG5 666 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 DLGAP5Q15398 846 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 STYK1Q6J9G0 422 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 MXRA8Q9BRK3 442 aa27.68■■■□□ 2.02
RAB40C-201ENST00000248139 CUL1Q13616 776 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 CD302Q8IX05 232 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 TMBIM4Q9HC24 238 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 INTUQ9ULD6 942 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 CCPG1Q9ULG6 757 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 CNTNAP1P78357 1384 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 SPP2Q13103 211 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 ITGB3BPQ13352 177 aaPredicted RBP27.67■■■□□ 2.02
RAB40C-201ENST00000248139 B3GNT9Q6UX72 402 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 MICALL1Q8N3F8 863 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 KRT35Q92764 455 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 SEL1LQ9UBV2 794 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 ODF2LQ9ULJ1 636 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 ZHX2Q9Y6X8 837 aa27.67■■■□□ 2.02
RAB40C-201ENST00000248139 MYO1FO00160 1098 aa27.66■■■□□ 2.02
RAB40C-201ENST00000248139 TMOD1P28289 359 aa27.66■■■□□ 2.02
RAB40C-201ENST00000248139 MKRN4PQ13434 485 aaPredicted RBP27.66■■■□□ 2.02
RAB40C-201ENST00000248139 FAM84AQ96KN4 292 aa27.66■■■□□ 2.02
RAB40C-201ENST00000248139 PPANQ9NQ55 473 aaKnown RBP27.66■■■□□ 2.02
RAB40C-201ENST00000248139 ZNF646O15015 1829 aaPredicted RBP27.66■■■□□ 2.02
RAB40C-201ENST00000248139 PPP1R37O75864 691 aa27.66■■■□□ 2.02
RAB40C-201ENST00000248139 FTLP02792 175 aaPredicted RBP27.66■■■□□ 2.02
RAB40C-201ENST00000248139 DHX9Q08211 1270 aaKnown RBP27.66■■■□□ 2.02
RAB40C-201ENST00000248139 AGPAT1Q99943 283 aa27.66■■■□□ 2.02
RAB40C-201ENST00000248139 STXBP4Q6ZWJ1 553 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 FAM151AQ8WW52 585 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 RBBP6Q7Z6E9 1792 aaKnown RBP27.65■■■□□ 2.02
RAB40C-201ENST00000248139 CCDC188H7C350 402 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 MYZAPP0CAP1 466 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 GUCY2CP25092 1073 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 BTBD6Q96KE9 485 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 KIFC3Q9BVG8 833 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 STRA6Q9BX79 667 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 ZNF277Q9NRM2 450 aaPredicted RBP27.65■■■□□ 2.02
RAB40C-201ENST00000248139 CTTNBP2NLQ9P2B4 639 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 ATP8A1Q9Y2Q0 1164 aa27.65■■■□□ 2.02
RAB40C-201ENST00000248139 KRT13P13646 458 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 ANXA13P27216 316 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 NPEPPSP55786 919 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 POU5F1Q01860 360 aaKnown RBP27.64■■■□□ 2.02
RAB40C-201ENST00000248139 PPP2R5AQ15172 486 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 NFIL3Q16649 462 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 ALG6Q9Y672 507 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 NCANO14594 1321 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 GOLGA6L10A6NI86 522 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 C1orf220Q5T0J3 134 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 RPUSD2Q8IZ73 545 aaKnown RBP27.64■■■□□ 2.02
RAB40C-201ENST00000248139 CCDC26Q8TAB7 109 aa27.64■■■□□ 2.02
RAB40C-201ENST00000248139 SLC16A4O15374 487 aa27.64■■■□□ 2.01
RAB40C-201ENST00000248139 SGPL1O95470 568 aa27.64■■■□□ 2.01
RAB40C-201ENST00000248139 CALCAP01258 141 aa27.64■■■□□ 2.01
RAB40C-201ENST00000248139 MDH1P40925 334 aaKnown RBP27.64■■■□□ 2.01
RAB40C-201ENST00000248139 VAMP7P51809 220 aa27.64■■■□□ 2.01
RAB40C-201ENST00000248139 UGCGQ16739 394 aa27.64■■■□□ 2.01
RAB40C-201ENST00000248139 BBXQ8WY36 941 aaPredicted RBP27.64■■■□□ 2.01
RAB40C-201ENST00000248139 POP1Q99575 1024 aaKnown RBP27.64■■■□□ 2.01
RAB40C-201ENST00000248139 DHX15O43143 795 aaKnown RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 RSBN1LQ6PCB5 846 aaPredicted RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 TMC3Q7Z5M5 1100 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 CNKSR1Q969H4 720 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 UTP11Q9Y3A2 253 aaKnown RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 BHMG1C9JSJ3 638 aaPredicted RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 ALAS1P13196 640 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 EIF2AK2P19525 551 aaKnown RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 CAP2P40123 477 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 UBAP2Q5T6F2 1119 aaKnown RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 PLA2G4FQ68DD2 849 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 ATP8B4Q8TF62 1192 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 CCDC127Q96BQ5 260 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 LRRC45Q96CN5 670 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 PCDHB18PQ96TA0 734 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 ZNF341Q9BYN7 854 aa27.63■■■□□ 2.01
RAB40C-201ENST00000248139 NOVA2Q9UNW9 492 aaKnown RBP27.63■■■□□ 2.01
RAB40C-201ENST00000248139 ZNF536O15090 1300 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 ANKRD62A6NC57 917 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 RARRES1P49788 294 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 PEX3P56589 373 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 MESDQ14696 234 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 PTGISQ16647 500 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 ODF2Q5BJF6 829 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 C18orf8Q96DM3 657 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 SLITRK6Q9H5Y7 841 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 CNOT8Q9UFF9 292 aaKnown RBP27.62■■■□□ 2.01
RAB40C-201ENST00000248139 SNX24Q9Y343 169 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 HMGB1P1B2RPK0 211 aaPredicted RBP27.62■■■□□ 2.01
RAB40C-201ENST00000248139 E7EVH7 732 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 MRPS9P82933 396 aaKnown RBP27.62■■■□□ 2.01
RAB40C-201ENST00000248139 CHADLQ6NUI6 762 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 SAAL1Q96ER3 474 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 EHMT1Q9H9B1 1298 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 RAVER2Q9HCJ3 691 aaKnown RBP27.62■■■□□ 2.01
RAB40C-201ENST00000248139 HSPBP1Q9NZL4 362 aa27.62■■■□□ 2.01
RAB40C-201ENST00000248139 SOX10P56693 466 aa27.61■■■□□ 2.01
RAB40C-201ENST00000248139 SETQ01105 290 aaPredicted RBP27.61■■■□□ 2.01
RAB40C-201ENST00000248139 MAP2K1Q02750 393 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms