RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FUT4P22083 530 aa4□□□□□ -1.77
UFM1-201ENST00000239878 GARTP22102 1010 aa4□□□□□ -1.77
UFM1-201ENST00000239878 HSD17B4P51659 736 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ZNF75DP51815 510 aa4□□□□□ -1.77
UFM1-201ENST00000239878 NEK2P51955 445 aa4□□□□□ -1.77
UFM1-201ENST00000239878 PRKG1Q13976 671 aa4□□□□□ -1.77
UFM1-201ENST00000239878 GALEQ14376 348 aa4□□□□□ -1.77
UFM1-201ENST00000239878 BRD3Q15059 726 aa4□□□□□ -1.77
UFM1-201ENST00000239878 LONRF2Q1L5Z9 754 aa4□□□□□ -1.77
UFM1-201ENST00000239878 OXLD1Q5BKU9 147 aa4□□□□□ -1.77
UFM1-201ENST00000239878 FAM102BQ5T8I3 360 aa4□□□□□ -1.77
UFM1-201ENST00000239878 MIS18BP1Q6P0N0 1132 aa4□□□□□ -1.77
UFM1-201ENST00000239878 TMTC3Q6ZXV5 915 aa4□□□□□ -1.77
UFM1-201ENST00000239878 KRT77Q7Z794 578 aa4□□□□□ -1.77
UFM1-201ENST00000239878 UBE2Q1Q7Z7E8 422 aa4□□□□□ -1.77
UFM1-201ENST00000239878 STAG2Q8N3U4 1231 aa4□□□□□ -1.77
UFM1-201ENST00000239878 MAB21L3Q8N8X9 362 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SMCR8Q8TEV9 937 aaPredicted RBP4□□□□□ -1.77
UFM1-201ENST00000239878 TCP11Q8WWU5 503 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SLC35B4Q969S0 331 aa4□□□□□ -1.77
UFM1-201ENST00000239878 RBM41Q96IZ5 413 aaKnown RBP4□□□□□ -1.77
UFM1-201ENST00000239878 TRIM47Q96LD4 638 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SLF1Q9BQI6 1058 aa4□□□□□ -1.77
UFM1-201ENST00000239878 TRIM7Q9C029 511 aa4□□□□□ -1.77
UFM1-201ENST00000239878 TRIM4Q9C037 500 aa4□□□□□ -1.77
UFM1-201ENST00000239878 FAM107BQ9H098 131 aa4□□□□□ -1.77
UFM1-201ENST00000239878 RABEP2Q9H5N1 569 aa4□□□□□ -1.77
UFM1-201ENST00000239878 IFT122Q9HBG6 1241 aa4□□□□□ -1.77
UFM1-201ENST00000239878 CABP5Q9NP86 173 aa4□□□□□ -1.77
UFM1-201ENST00000239878 IPPQ9Y573 584 aa4□□□□□ -1.77
UFM1-201ENST00000239878 TK2O00142 265 aa4□□□□□ -1.77
UFM1-201ENST00000239878 PDPK1O15530 556 aa4□□□□□ -1.77
UFM1-201ENST00000239878 EDIL3O43854 480 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ICAM1P05362 532 aa4□□□□□ -1.77
UFM1-201ENST00000239878 FESP07332 822 aa4□□□□□ -1.77
UFM1-201ENST00000239878 CYP2C8P10632 490 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ERVK-9P63128 1117 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ERVK-24P63145 666 aa4□□□□□ -1.77
UFM1-201ENST00000239878 CCZ1BP86790 482 aa4□□□□□ -1.77
UFM1-201ENST00000239878 CCZ1P86791 482 aaPredicted RBP4□□□□□ -1.77
UFM1-201ENST00000239878 ZNF792Q3KQV3 632 aa4□□□□□ -1.77
UFM1-201ENST00000239878 GPATCH4Q5T3I0 446 aaKnown RBP4□□□□□ -1.77
UFM1-201ENST00000239878 OLFML2BQ68BL8 750 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SLFN13Q68D06 897 aa4□□□□□ -1.77
UFM1-201ENST00000239878 GALNT17Q6IS24 598 aa4□□□□□ -1.77
UFM1-201ENST00000239878 MAMDC4Q6UXC1 1216 aa4□□□□□ -1.77
UFM1-201ENST00000239878 LRRC47Q8N1G4 583 aaKnown RBP4□□□□□ -1.77
UFM1-201ENST00000239878 TEX19Q8NA77 164 aa4□□□□□ -1.77
UFM1-201ENST00000239878 THAP3Q8WTV1 239 aaPredicted RBP4□□□□□ -1.77
UFM1-201ENST00000239878 ZNF296Q8WUU4 475 aaPredicted RBP4□□□□□ -1.77
UFM1-201ENST00000239878 CLIP3Q96DZ5 547 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ZNF274Q96GC6 653 aaPredicted RBP4□□□□□ -1.77
UFM1-201ENST00000239878 FAM81BQ96LP2 452 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SPON2Q9BUD6 331 aa4□□□□□ -1.77
UFM1-201ENST00000239878 CARD6Q9BX69 1037 aa4□□□□□ -1.77
UFM1-201ENST00000239878 JMJD4Q9H9V9 463 aa4□□□□□ -1.77
UFM1-201ENST00000239878 SUGCTQ9HAC7 445 aa4□□□□□ -1.77
UFM1-201ENST00000239878 MKNK2Q9HBH9 465 aa4□□□□□ -1.77
UFM1-201ENST00000239878 ARFGAP3Q9NP61 516 aa4□□□□□ -1.77
UFM1-201ENST00000239878 PNMA3Q9UL41 463 aa4□□□□□ -1.77
UFM1-201ENST00000239878 A0A1W2PRU2 124 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 TSPY2A6NKD2 308 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 CCDC85CA6NKD9 419 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 SMAD7O15105 426 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 AHCYL1O43865 530 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 PFKFB2O60825 505 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 KATNA1O75449 491 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 UPP2O95045 317 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 ASMTLO95671 621 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 BMP3P12645 472 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 SYT1P21579 422 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 PDIA3P30101 505 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 CTCFP49711 727 aaPredicted RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 SLC8A3P57103 927 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 PABPC4Q13310 644 aaKnown RBP eCLIP3.99□□□□□ -1.77
UFM1-201ENST00000239878 PIN1Q13526 163 aaPredicted RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 SNW1Q13573 536 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 COG2Q14746 738 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 MYBPC3Q14896 1274 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 PPP2R5BQ15173 497 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 ACCSLQ4AC99 568 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 CEP85LQ5SZL2 805 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 CAPRIN2Q6IMN6 1127 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 ALKBH2Q6NS38 261 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 SLC30A9Q6PML9 568 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 LVRNQ6Q4G3 990 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 SYCP3Q8IZU3 236 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 ZNF444Q8N0Y2 327 aaPredicted RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 SRBD1Q8N5C6 995 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 SMARCC2Q8TAQ2 1214 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 ADAM32Q8TC27 787 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 BICD2Q8TD16 824 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 ATG4CQ96DT6 458 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 NUP88Q99567 741 aaPredicted RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 ARHGAP39Q9C0H5 1083 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 FAM204AQ9H8W3 233 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 KLC4Q9NSK0 619 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 FBXO28Q9NVF7 368 aa3.99□□□□□ -1.77
UFM1-201ENST00000239878 UTP6Q9NYH9 597 aaKnown RBP3.99□□□□□ -1.77
UFM1-201ENST00000239878 TPCN1Q9ULQ1 816 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms