RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
HDHD3-201ENST00000238379 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
HDHD3-201ENST00000238379 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
HDHD3-201ENST00000238379 HSPBP1Q9NZL4 362 aa16.65■□□□□ 0.26
HDHD3-201ENST00000238379 TRPC6Q9Y210 931 aa16.65■□□□□ 0.26
HDHD3-201ENST00000238379 GAS2O43903 313 aaKnown RBP16.64■□□□□ 0.25
HDHD3-201ENST00000238379 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 ZNF865P0CJ78 1059 aaPredicted RBP16.64■□□□□ 0.25
HDHD3-201ENST00000238379 CYP2C19P33261 490 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 ZBED6P86452 979 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 BRDTQ58F21 947 aaPredicted RBP16.64■□□□□ 0.25
HDHD3-201ENST00000238379 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
HDHD3-201ENST00000238379 IER5Q5VY09 327 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 SLC39A4Q6P5W5 647 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 APBA2Q99767 749 aa16.64■□□□□ 0.25
HDHD3-201ENST00000238379 MMP3P08254 477 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 CAPSQ13938 189 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 TCERG1LQ5VWI1 586 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 DEPTORQ8TB45 409 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 TRAPPC12Q8WVT3 735 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
HDHD3-201ENST00000238379 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 SUGCTQ9HAC7 445 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 LRRIQ4A6NIV6 560 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 SOWAHDA6NJG2 315 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 TMTC1Q8IUR5 882 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 RDH13Q8NBN7 331 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 NEK11Q8NG66 645 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 TCP11Q8WWU5 503 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 JPH2Q9BR39 696 aaPredicted RBP16.63■□□□□ 0.25
HDHD3-201ENST00000238379 EDEM3Q9BZQ6 932 aa16.63■□□□□ 0.25
HDHD3-201ENST00000238379 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
HDHD3-201ENST00000238379 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
HDHD3-201ENST00000238379 MAPK13O15264 365 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 AOC2O75106 756 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 NOL4O94818 638 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 INSRRP14616 1297 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
HDHD3-201ENST00000238379 BFSP1Q12934 665 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 MTF1Q14872 753 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 ZNF484Q5JVG2 852 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 DPY19L2P1Q6NXN4 242 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 RAD9BQ6WBX8 426 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
HDHD3-201ENST00000238379 ZNF397Q8NF99 534 aaPredicted RBP16.62■□□□□ 0.25
HDHD3-201ENST00000238379 A6NJR5 290 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 H3BRB1 525 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 K7ERI5 159 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 HNRNPDLO14979 420 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 ADCY3O60266 1144 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 LAMTOR4Q0VGL1 99 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 MEA1Q16626 185 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 DEFB115Q30KQ5 88 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 CYP26C1Q6V0L0 522 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 TOGARAM2Q6ZUX3 1019 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 BAP1Q92560 729 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 CHP1Q99653 195 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 GTPBP10A4D1E9 387 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 DYNC1LI2O43237 492 aaPredicted RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 OFD1O75665 1012 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 C22orf31O95567 290 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 PIGRP01833 764 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 GARTP22102 1010 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 HNRNPH3P31942 346 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 STRN3Q13033 797 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 DGKDQ16760 1214 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 TSR1Q2NL82 804 aaKnown RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 ZBTB10Q96DT7 871 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 PPP1R13BQ96KQ4 1090 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 FBXL18Q96ME1 805 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 ARHGAP39Q9C0H5 1083 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
HDHD3-201ENST00000238379 PLAGL2Q9UPG8 496 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 STYXL1Q9Y6J8 313 aa16.61■□□□□ 0.25
HDHD3-201ENST00000238379 GOLGA8IPA6NC78 632 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 GOLGA8JA6NMD2 632 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 KRT13P13646 458 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 SLC9A1P19634 815 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 PON1P27169 355 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 PSMC4P43686 418 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 FMO5P49326 533 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 VAMP7P51809 220 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 FCGRTP55899 365 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
HDHD3-201ENST00000238379 APBA1Q02410 837 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms