RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CCSER1Q9C0I3 900 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 CCDC113Q9H0I3 377 aa15.25■□□□□ 0.03
VEGFA-201ENST00000230480 NPHP3-ACAD11A0A0J9YXS1 232 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 TSPAN1O60635 241 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 LONP1P36776 959 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 AFF1P51825 1210 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 CAMK1Q14012 370 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 CABP7Q86V35 215 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 EXOC8Q8IYI6 725 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 SLC17A8Q8NDX2 589 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 CLP1Q92989 425 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 AK8Q96MA6 479 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 CASD1Q96PB1 797 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 ZBED2Q9BTP6 218 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 FZD8Q9H461 694 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 ELAC1Q9H777 363 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 C1orf112Q9NSG2 853 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
VEGFA-201ENST00000230480 PLXNA4Q9HCM2 1894 aa15.24■□□□□ 0.03
VEGFA-201ENST00000230480 ARHGEF35A5YM69 484 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 B4GALT3O60512 393 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 ZNF623O75123 536 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 BMP15O95972 392 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 PLCG1P19174 1290 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-201ENST00000230480 FAM43BQ6ZT52 329 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-201ENST00000230480 MRPL10Q7Z7H8 261 aaKnown RBP15.23■□□□□ 0.03
VEGFA-201ENST00000230480 SMG8Q8ND04 991 aaKnown RBP15.23■□□□□ 0.03
VEGFA-201ENST00000230480 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 CWH43Q9H720 699 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 TMEM161AQ9NX61 479 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
VEGFA-201ENST00000230480 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 PLA2G4BP0C869 781 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
VEGFA-201ENST00000230480 PHKA2P46019 1235 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 MCPH1Q8NEM0 835 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 SYMPKQ92797 1274 aaKnown RBP15.22■□□□□ 0.03
VEGFA-201ENST00000230480 LPPQ93052 612 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 CPB2Q96IY4 423 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 TGS1Q96RS0 853 aaKnown RBP15.22■□□□□ 0.03
VEGFA-201ENST00000230480 FIZ1Q96SL8 496 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 YME1L1Q96TA2 773 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 EIF2AQ9BY44 585 aaKnown RBP15.22■□□□□ 0.03
VEGFA-201ENST00000230480 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 MTCH2Q9Y6C9 303 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 STK24Q9Y6E0 443 aa15.22■□□□□ 0.03
VEGFA-201ENST00000230480 DENND3A2RUS2 1198 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 C5orf67F2Z3F1 127 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 SLC26A4O43511 780 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 HIP1RO75146 1068 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 GUCY2CP25092 1073 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 DNAJB1P25685 340 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 DNM1Q05193 864 aaKnown RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 MCM6Q14566 821 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 ZRSR1Q15695 479 aaKnown RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 NT5DC1Q5TFE4 455 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 SHC4Q6S5L8 630 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 CATSPER4Q7RTX7 472 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 TMEM192Q8IY95 271 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 CMTR2Q8IYT2 770 aaKnown RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 GDPD5Q8WTR4 605 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 INO80BQ9C086 356 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-201ENST00000230480 RCOR1Q9UKL0 485 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 MTUS1Q9ULD2 1270 aa15.21■□□□□ 0.03
VEGFA-201ENST00000230480 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 ABLIM1O14639 778 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 OFD1O75665 1012 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 SFPQP23246 707 aaKnown RBP eCLIP15.2■□□□□ 0.02
VEGFA-201ENST00000230480 BMPR1AP36894 532 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 NAMPTP43490 491 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 NPTX2P47972 431 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 E2F4Q16254 413 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 FAM187BQ17R55 369 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 PAN2Q504Q3 1202 aaKnown RBP15.2■□□□□ 0.02
VEGFA-201ENST00000230480 ODR4Q5SWX8 454 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 KCTD17Q8N5Z5 321 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 RAD54LQ92698 747 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 SCLT1Q96NL6 688 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 NTPCRQ9BSD7 190 aaKnown RBP15.2■□□□□ 0.02
VEGFA-201ENST00000230480 PRDM6Q9NQX0 595 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 FAM105AQ9NUU6 356 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms