RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RAB17Q9H0T7 212 aa17.62■□□□□ 0.41
LTBR-201ENST00000228918 SEPT11Q9NVA2 429 aaKnown RBP17.62■□□□□ 0.41
LTBR-201ENST00000228918 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
LTBR-201ENST00000228918 ARHGEF35A5YM69 484 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 FOXN3O00409 490 aaPredicted RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 FAM107AO95990 144 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 AOC3Q16853 763 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 SYCP3Q8IZU3 236 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 HOOK2Q96ED9 719 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 MYCBPQ99417 103 aaPredicted RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 NAP1L3Q99457 506 aaPredicted RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 AGPAT1Q99943 283 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 HMGB2P26583 209 aaKnown RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 HADHBP55084 474 aaKnown RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 DHX9Q08211 1270 aaKnown RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 PRPF4BQ13523 1007 aaKnown RBP17.61■□□□□ 0.41
LTBR-201ENST00000228918 PPP2R5EQ16537 467 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 TXLNGYQ9BZA5 131 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
LTBR-201ENST00000228918 GOLGA6L10A0A0M3HER8 536 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 K7ENM7 598 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 IPO5O00410 1097 aaKnown RBP17.6■□□□□ 0.41
LTBR-201ENST00000228918 MEFVO15553 781 aaPredicted RBP17.6■□□□□ 0.41
LTBR-201ENST00000228918 PPFIA2O75334 1257 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 MICALCLQ6ZW33 695 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 RHOT2Q8IXI1 618 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 RDH13Q8NBN7 331 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 NEK9Q8TD19 979 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 CHURC1Q8WUH1 139 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 SLC20A1Q8WUM9 679 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 ALG3Q92685 438 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 KAT2BQ92831 832 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 FMO2Q99518 471 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
LTBR-201ENST00000228918 FAM170AA1A519 330 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 E7EVH7 732 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 KIAA0754O94854 1291 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 BCRP11274 1271 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 KRT13P13646 458 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 DLG4P78352 724 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 DR1Q01658 176 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 SPDYCQ5MJ68 293 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 DUPD1Q68J44 220 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
LTBR-201ENST00000228918 ZBTB21Q9ULJ3 1066 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 EMSYQ7Z589 1322 aa17.6■□□□□ 0.41
LTBR-201ENST00000228918 VCAM1P19320 739 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 PPP2R2AP63151 447 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 ZNF211Q13398 564 aaPredicted RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 SWT1Q5T5J6 900 aaKnown RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 C11orf63Q6NUN7 778 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 PADI6Q6TGC4 694 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 PAXIP1Q6ZW49 1069 aaPredicted RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 YTHDF3Q7Z739 585 aaKnown RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 ARHGEF19Q8IW93 802 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 RIT2Q99578 217 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 ERP44Q9BS26 406 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 TRIM31Q9BZY9 425 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 PSME4Q14997 1843 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 LOC102724159A0A0B4J2E5 919 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 FAM187AA6NFU0 413 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 COPB2P35606 906 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 TCEAL1Q15170 157 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 PWP2Q15269 919 aaKnown RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 CLUL1Q15846 466 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 ADAT2Q7Z6V5 191 aaKnown RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 MXRA8Q9BRK3 442 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 UBE2TQ9NPD8 197 aaPredicted RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 PPANQ9NQ55 473 aaKnown RBP17.59■□□□□ 0.41
LTBR-201ENST00000228918 ZDHHC18Q9NUE0 388 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 BCCIPQ9P287 314 aaKnown RBP eCLIP17.59■□□□□ 0.41
LTBR-201ENST00000228918 GGA2Q9UJY4 613 aa17.59■□□□□ 0.41
LTBR-201ENST00000228918 TISP43B9A030 160 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 TCP10L2B9ZVM9 353 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 P4HA2O15460 535 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 PLA2G6O60733 806 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 PPP3CAQ08209 521 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 DHX34Q14147 1143 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 KRT71Q3SY84 523 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 OTUD6BQ8N6M0 293 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 TMEM174Q8WUU8 243 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 TMEM206Q9H813 350 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 VCPKMTQ9H867 229 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 CNOT8Q9UFF9 292 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 NOVA2Q9UNW9 492 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 ALG6Q9Y672 507 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 PFASO15067 1338 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 DDX39AO00148 427 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 PAEPP09466 180 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 MAPTP10636 758 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 VAMP7P51809 220 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms