RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PACSIN1Q9BY11 444 aa27.07■■□□□ 1.92
RUNDC3A-201ENST00000225441 ISCUQ9H1K1 167 aa27.07■■□□□ 1.92
RUNDC3A-201ENST00000225441 DIS3Q9Y2L1 958 aaKnown RBP27.07■■□□□ 1.92
RUNDC3A-201ENST00000225441 BHMG1C9JSJ3 638 aaPredicted RBP27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 FAM13AO94988 1023 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 ACTN1P12814 892 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 GTF2A2P52657 109 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 TKFCQ3LXA3 575 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 TPCN2Q8NHX9 752 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 KRT12Q99456 494 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 RUSC1Q9BVN2 902 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 RBBP6Q7Z6E9 1792 aaKnown RBP27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 CETPP11597 493 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 OSBPP22059 807 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 RFX1P22670 979 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 HUNKP57058 714 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 PPP2R5AQ15172 486 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 SPRYD7Q5W111 196 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 LRIG3Q6UXM1 1119 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 C1orf186Q6ZWK4 172 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLC5A5Q92911 643 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 MS4A4AQ96JQ5 239 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 MAP3K20Q9NYL2 800 aaKnown RBP27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 ODF2LQ9ULJ1 636 aa27.06■■□□□ 1.92
RUNDC3A-201ENST00000225441 PASKQ96RG2 1323 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 KIF3CO14782 793 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 ZBTB48P10074 688 aaPredicted RBP27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 HSPA9P38646 679 aaKnown RBP27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 CARSP49589 748 aaKnown RBP27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 ZNF131P52739 623 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 MKRN3Q13064 507 aaKnown RBP27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 CLUL1Q15846 466 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 OTOP1Q7RTM1 612 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 RASGEF1CQ8N431 466 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 ZIM3Q96PE6 472 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 STK33Q9BYT3 514 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 GCNT4Q9P109 453 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 TTC7AQ9ULT0 858 aaPredicted RBP27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 NFU1Q9UMS0 254 aa27.05■■□□□ 1.92
RUNDC3A-201ENST00000225441 SRRM3A6NNA2 597 aaPredicted RBP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 PGRMC1O00264 195 aaKnown RBP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 EIF3HO15372 352 aaKnown RBP eCLIP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 TGFB1I1O43294 461 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 PSMD10O75832 226 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 PLS1Q14651 629 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 DCAF17Q5H9S7 520 aaPredicted RBP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 CASKIN2Q8WXE0 1202 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 WDR11Q9BZH6 1224 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 PARVGQ9HBI0 331 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 RSPH14Q9UHP6 348 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 STXBP5LQ9Y2K9 1186 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 KCNK3O14649 394 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 NOP2P46087 812 aaKnown RBP27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 CORO7P57737 925 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 PPP2R5EQ16537 467 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 GPIHBP1Q8IV16 184 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 FAM186BQ8IYM0 893 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 NACC1Q96RE7 527 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLITRK6Q9H5Y7 841 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 BTBD7Q9P203 1132 aa27.04■■□□□ 1.92
RUNDC3A-201ENST00000225441 FRMPD4Q14CM0 1322 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 CCL15-CCL14A0A0B4J2E2 113 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 CCL15Q16663 113 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 TCERG1LQ5VWI1 586 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 HS2ST1Q7LGA3 356 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLC9A9Q8IVB4 645 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 TMEM174Q8WUU8 243 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 DMAC2Q9NW81 257 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 COL20A1Q9P218 1284 aa27.03■■□□□ 1.92
RUNDC3A-201ENST00000225441 EML1O00423 815 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLITRK3O94933 977 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 MAGEA9P43362 315 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 KDM7AQ6ZMT4 941 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 RNF207Q6ZRF8 634 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLC30A5Q8TAD4 765 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 NEK9Q8TD19 979 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SYTL5Q8TDW5 730 aaPredicted RBP27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 LRRC45Q96CN5 670 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 CCDC43Q96MW1 224 aaKnown RBP27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 NCANO14594 1321 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 RSPH10B2B2RC85 870 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 RAD51CO43502 376 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 ZEB2O60315 1214 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 RSPH10BP0C881 870 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SOX5P35711 763 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 RPS6P62753 249 aaKnown RBP27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SETQ01105 290 aaPredicted RBP27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 TTMPQ5BVD1 217 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 LRCH2Q5VUJ6 765 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 NSMFQ6X4W1 530 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 SLC30A10Q6XR72 485 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 MYCT1Q8N699 235 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 BRI3BPQ8WY22 251 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 IFT81Q8WYA0 676 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 ACAD9Q9H845 621 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 PCDHB13Q9Y5F0 798 aa27.02■■□□□ 1.92
RUNDC3A-201ENST00000225441 LOXHD1Q8IVV2 1947 aa27.01■■□□□ 1.92
RUNDC3A-201ENST00000225441 HMGB1P1B2RPK0 211 aaPredicted RBP27.01■■□□□ 1.91
RUNDC3A-201ENST00000225441 CYP4A11Q02928 519 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms