RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 DRAP1Q14919 205 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 EPB41L4AQ9HCS5 686 aaPredicted RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 SEL1LQ9UBV2 794 aa19.74■□□□□ 0.75
CLIP2-201ENST00000223398 G3BP2Q9UN86 482 aaKnown RBP19.74■□□□□ 0.75
CLIP2-201ENST00000223398 SEC31AO94979 1220 aaKnown RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 EYA4O95677 639 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 KRT3P12035 628 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PLA2G4FQ68DD2 849 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 SMARCAD1Q9H4L7 1026 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PPRC1Q5VV67 1664 aaKnown RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 MT-ND3P03897 115 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PDHBP11177 359 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 SLMAPQ14BN4 828 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 DUOXA2Q1HG44 320 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 GNASQ5JWF2 1037 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 OLA1Q9NTK5 396 aaKnown RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 LGALS16A8MUM7 142 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 TOM1L1O75674 476 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 FSD1LQ9BXM9 530 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 TRPC7Q9HCX4 862 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 CTNND1O60716 968 aaKnown RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PALMO75781 387 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 TBXAS1P24557 533 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 RCN2Q14257 317 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PDE11AQ9HCR9 933 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 BAG5Q9UL15 447 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 ORC2Q13416 577 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 ARID5BQ14865 1188 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 VEPH1Q14D04 833 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 BZW1Q7L1Q6 419 aaKnown RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 IFT43Q96FT9 208 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 PRMT6Q96LA8 375 aaPredicted RBP19.73■□□□□ 0.75
CLIP2-201ENST00000223398 NUDT12Q9BQG2 462 aa19.73■□□□□ 0.75
CLIP2-201ENST00000223398 GRIK1P39086 918 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 NNMTP40261 264 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 ATP2C1P98194 919 aaPredicted RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 XKR3Q5GH77 459 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 RSRC1Q96IZ7 334 aaKnown RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 PANX2Q96RD6 677 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 INTS9Q9NV88 658 aaKnown RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 ADAMTS13Q76LX8 1427 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 WDR91A4D1P6 747 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 TJP3O95049 919 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 CALB1P05937 261 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 SMAD1Q15797 465 aaKnown RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 WDR72Q3MJ13 1102 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 AGBL3Q8NEM8 1001 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 CAPS2Q9BXY5 557 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 TADA2AO75478 443 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 EFNA5P52803 228 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 PDIA6Q15084 440 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 LRRC71Q8N4P6 559 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 RASSF2P50749 326 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 GPC5P78333 572 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 TKFCQ3LXA3 575 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 FAM102AQ5T9C2 384 aaPredicted RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 MAP3K20Q9NYL2 800 aaKnown RBP19.72■□□□□ 0.75
CLIP2-201ENST00000223398 STAP1Q9ULZ2 295 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 AGAP1Q9UPQ3 857 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
CLIP2-201ENST00000223398 BAG2O95816 211 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 IL9RQ01113 521 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 IL1RL1Q01638 556 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 SREBF2Q12772 1141 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 BTBD8Q5XKL5 378 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 PYROXD1Q8WU10 500 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 KATNAL1Q9BW62 490 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 BAIAP2L1Q9UHR4 511 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 GOLGA8MH3BSY2 632 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 FMR1NBQ8N0W7 255 aaPredicted RBP19.71■□□□□ 0.75
CLIP2-201ENST00000223398 PTPRUQ92729 1446 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 ZNF560Q96MR9 790 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 RAB3IPQ96QF0 476 aaPredicted RBP19.71■□□□□ 0.75
CLIP2-201ENST00000223398 TUFT1Q9NNX1 390 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 STRIP2Q9ULQ0 834 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 MED14O60244 1454 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 EXOC1LA0A1B0GW35 172 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 ZRANB2O95218 330 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLIP2-201ENST00000223398 ARHGAP25P42331 645 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 DCAF4L1Q3SXM0 396 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 SHC4Q6S5L8 630 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 PDIK1LQ8N165 341 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 IGDCC4Q8TDY8 1250 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 NUP85Q9BW27 656 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 SENP2Q9HC62 589 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 NSUN2Q08J23 767 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLIP2-201ENST00000223398 FBXO28Q9NVF7 368 aa19.71■□□□□ 0.75
CLIP2-201ENST00000223398 NVLO15381 856 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 NFKBIAP25963 317 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 GTF2A1P52655 376 aaPredicted RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 STX1BP61266 288 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 RPS6KA5O75582 802 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 HACD3Q9P035 362 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 SNX9Q9Y5X1 595 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 PIK3C2BO00750 1634 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 TTC36A6NLP5 189 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 MYBP10242 640 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms