RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 WHAMMQ8TF30 809 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SAAL1Q96ER3 474 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 ERVK-5Q9HDB9 667 aa15.85■□□□□ 0.13
CNOT3-201ENST00000221232 SUCLA2Q9P2R7 463 aaPredicted RBP15.85■□□□□ 0.13
CNOT3-201ENST00000221232 NRXN2Q9P2S2 1712 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 GTPBP10A4D1E9 387 aaKnown RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 EBAG9O00559 213 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 PLSCR1O15162 318 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 NR1D1P20393 614 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 MAP2K1Q02750 393 aaPredicted RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 SLFN11Q7Z7L1 901 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 SYCE1Q8N0S2 351 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 EHMT1Q9H9B1 1298 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 PPANQ9NQ55 473 aaKnown RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 NENFQ9UMX5 172 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 CCDC169A6NNP5 214 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 ZBTB48P10074 688 aaPredicted RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 MARCKSL1P49006 195 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 LIG3P49916 1009 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 VAMP7P51809 220 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 ZNF131P52739 623 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 SPP2Q13103 211 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 MESDQ14696 234 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 UGCGQ16739 394 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 FAM102BQ5T8I3 360 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 RPUSD2Q8IZ73 545 aaKnown RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 UHMK1Q8TAS1 419 aaKnown RBP15.84■□□□□ 0.13
CNOT3-201ENST00000221232 PLEKHO2Q8TD55 490 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 RFFLQ8WZ73 363 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 HES6Q96HZ4 224 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 TAAR1Q96RJ0 339 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 CNTNAP1P78357 1384 aa15.84■□□□□ 0.13
CNOT3-201ENST00000221232 GOLGA6L10A6NI86 522 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 ATP9AO75110 1047 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 SGPL1O95470 568 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 COL11A2P13942 1736 aaPredicted RBP15.83■□□□□ 0.13
CNOT3-201ENST00000221232 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.13
CNOT3-201ENST00000221232 PPM1KQ8N3J5 372 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 ALG3Q92685 438 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 KRT35Q92764 455 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 AGPAT1Q99943 283 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 LARSQ9P2J5 1176 aaKnown RBP15.83■□□□□ 0.13
CNOT3-201ENST00000221232 USP20Q9Y2K6 914 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 ATP8A1Q9Y2Q0 1164 aa15.83■□□□□ 0.13
CNOT3-201ENST00000221232 QSER1Q2KHR3 1735 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 SMIM23A6NLE4 172 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 TMOD1P28289 359 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 SLC15A2Q16348 729 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 ATP6V1G3Q96LB4 118 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
CNOT3-201ENST00000221232 DDX3YO15523 660 aaKnown RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 MRPS9P82933 396 aaKnown RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 NSMFQ6X4W1 530 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 MICALL1Q8N3F8 863 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 LMO3Q8TAP4 145 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 TCEAL9Q9UHQ7 104 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 UTP11Q9Y3A2 253 aaKnown RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 ALG6Q9Y672 507 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 FAM169AQ9Y6X4 670 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 DCDC2CA8MYV0 355 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 CYP26A1O43174 497 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 HSPA9P38646 679 aaKnown RBP15.82■□□□□ 0.12
CNOT3-201ENST00000221232 RARRES1P49788 294 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 CCDC26Q8TAB7 109 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 HSPBP1Q9NZL4 362 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 FEM1BQ9UK73 627 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 SNX24Q9Y343 169 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 ZNF536O15090 1300 aa15.82■□□□□ 0.12
CNOT3-201ENST00000221232 MYZAPP0CAP1 466 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 LSP1P33241 339 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 MTMR1Q13613 665 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TKFCQ3LXA3 575 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 EPC2Q52LR7 807 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 CBWD2Q8IUF1 395 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TOPORSQ9NS56 1045 aaPredicted RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 FZD1Q9UP38 647 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 DHX15O43143 795 aaKnown RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 BCRP11274 1271 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 YWHABP31946 246 aaKnown RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 PLTPP55058 493 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 CORO7P57737 925 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 PPATQ06203 517 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TRAF1Q13077 416 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 SLC47A2Q86VL8 602 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 PCDHB18PQ96TA0 734 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 NOVA2Q9UNW9 492 aaKnown RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 A0A0A6YYK5 440 aaPredicted RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 ANKRD63C9JTQ0 380 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
CNOT3-201ENST00000221232 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms