RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 PHF20Q9BVI0 1012 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 EMSYQ7Z589 1322 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 PMS2P54278 862 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 YWHAHQ04917 246 aaPredicted RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 ART3Q13508 389 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 ELAC2Q9BQ52 826 aaKnown RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 STRIP2Q9ULQ0 834 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 KLC3Q6P597 504 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 KIF2CQ99661 725 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 FLT1P17948 1338 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 HSPA4LO95757 839 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 KRT39Q6A163 491 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 SCN4BQ8IWT1 228 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 CDC26Q8NHZ8 85 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 FAM217BQ9NTX9 383 aaPredicted RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 COPEO14579 308 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX17-201ENST00000216019 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 CALR3Q96L12 384 aaKnown RBP13.79□□□□□ -0.2
DDX17-201ENST00000216019 C2orf40Q9H1Z8 148 aa13.79□□□□□ -0.2
DDX17-201ENST00000216019 ATP1A1P05023 1023 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 NMT1P30419 496 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 PDCLQ13371 301 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 MTMR2Q13614 643 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 LMBRD2Q68DH5 695 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 DPF2Q92785 391 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 TUBB6Q9BUF5 446 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 EPC1Q9H2F5 836 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 IP6K2Q9UHH9 426 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 DAGLAQ9Y4D2 1042 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 SMIM24O75264 130 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 YWHABP31946 246 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 A0A0G2JND7 137 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 PAMP19021 973 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 RNF181Q9P0P0 153 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 LCMT1Q9UIC8 334 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 CCDC195A0A1B0GUA6 201 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 RASA4BC9J798 803 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 RASA4O43374 803 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 ESRRAP11474 423 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 GJD4Q96KN9 370 aaPredicted RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.78□□□□□ -0.22e-10■■■■□ 23.1
DDX17-201ENST00000216019 RGL1Q9NZL6 768 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 GRID2IPA4D2P6 1211 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 GLYCTKQ8IVS8 523 aa13.78□□□□□ -0.2
DDX17-201ENST00000216019 NOC2LQ9Y3T9 749 aaKnown RBP13.78□□□□□ -0.2
DDX17-201ENST00000216019 MAPK13O15264 365 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 TTC13Q8NBP0 860 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 DDX47Q9H0S4 455 aaKnown RBP13.77□□□□□ -0.2
DDX17-201ENST00000216019 SPECC1L-ADORA2AF8WAN1 911 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 MYBL1P10243 752 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 TMPRSS15P98073 1019 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 NME3Q13232 169 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 TAF1BQ53T94 588 aaPredicted RBP13.77□□□□□ -0.2
DDX17-201ENST00000216019 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.2
DDX17-201ENST00000216019 MID2Q9UJV3 735 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 POLIQ9UNA4 740 aa13.77□□□□□ -0.2
DDX17-201ENST00000216019 KRT37O76014 449 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 EYA4O95677 639 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 KITP10721 976 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 TSPY1Q01534 308 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 EPM2AIP1Q7L775 607 aaPredicted RBP13.77□□□□□ -0.21
DDX17-201ENST00000216019 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 LINC00116Q8NCU8 138 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 PITPNM3Q9BZ71 974 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 ACTR5Q9H9F9 607 aaPredicted RBP13.77□□□□□ -0.21
DDX17-201ENST00000216019 HMGCS2P54868 508 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 SPARCL1Q14515 664 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 MTF1Q14872 753 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 EPHA7Q15375 998 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 RASSF3Q86WH2 238 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 HACD3Q9P035 362 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 TAC1P20366 129 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 MX2P20592 715 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
DDX17-201ENST00000216019 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
DDX17-201ENST00000216019 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
DDX17-201ENST00000216019 TFDP2Q14188 446 aa13.76□□□□□ -0.21
DDX17-201ENST00000216019 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
DDX17-201ENST00000216019 NEXMIFQ5QGS0 1516 aa13.76□□□□□ -0.21
DDX17-201ENST00000216019 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms