RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 TFR2Q9UP52 801 aa20.28■□□□□ 0.84
CTSA-201ENST00000191018 MRFAP1Q9Y605 127 aa20.28■□□□□ 0.84
CTSA-201ENST00000191018 H0YCG3 227 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 AKR1B10O60218 316 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 KRT13P13646 458 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 ABCD1P33897 745 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 JAM2P57087 298 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 GPR20Q99678 358 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 NRBP2Q9NSY0 501 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 PCDHA13Q9Y5I0 950 aa20.27■□□□□ 0.84
CTSA-201ENST00000191018 ASB14A6NK59 587 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 LGR5O75473 907 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 ZBTB48P10074 688 aaPredicted RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 ARL2P36404 184 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 VAMP7P51809 220 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 NCBP1Q09161 790 aaKnown RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 SPRYD7Q5W111 196 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 SLC39A4Q6P5W5 647 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 TAS1R3Q7RTX0 852 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 IRF2BP2Q7Z5L9 587 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 FBXO16Q8IX29 292 aaPredicted RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 ANKRD13CQ8N6S4 541 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 C2orf69Q8N8R5 385 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 ZSWIM2Q8NEG5 633 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 IFIH1Q9BYX4 1025 aaKnown RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 SCP2P22307 547 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 RFC5P40937 340 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 DLG4P78352 724 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 MKRN3Q13064 507 aaKnown RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 ASIC2Q16515 512 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 ZNF792Q3KQV3 632 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 HSDL1Q3SXM5 330 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 TDRD12Q587J7 1177 aaKnown RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 C1orf220Q5T0J3 134 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 GPIHBP1Q8IV16 184 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 TSGA10Q9BZW7 698 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
CTSA-201ENST00000191018 DAAM1Q9Y4D1 1078 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 PPME1Q9Y570 386 aa20.26■□□□□ 0.83
CTSA-201ENST00000191018 P4HA2O15460 535 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 CELF2O95319 508 aaKnown RBP20.25■□□□□ 0.83
CTSA-201ENST00000191018 MYL7Q01449 175 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 KIF5AQ12840 1032 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 BRDTQ58F21 947 aaPredicted RBP20.25■□□□□ 0.83
CTSA-201ENST00000191018 ABRAQ8N0Z2 381 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 ZNF710Q8N1W2 664 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 PLEKHO2Q8TD55 490 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 SLC7A3Q8WY07 619 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 FBXL18Q96ME1 805 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 SPAG5Q96R06 1193 aa20.25■□□□□ 0.83
CTSA-201ENST00000191018 CTAGE9A4FU28 777 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 PJA2O43164 708 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 ADRB2P07550 413 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 GLRA2P23416 452 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 PRKCIP41743 596 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 NAMPTP43490 491 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 GFPT1Q06210 699 aaPredicted RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 KLHL30Q0D2K2 578 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 NAA30Q147X3 362 aaPredicted RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 IQCEQ6IPM2 695 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 LRRN4CLQ8ND94 238 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 EHBP1Q8NDI1 1231 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 LMO3Q8TAP4 145 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 ANKRD7Q92527 254 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 TMEM143Q96AN5 459 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 FAM167AQ96KS9 214 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 NAPGQ99747 312 aaPredicted RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 BZW2Q9Y6E2 419 aaKnown RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 EMSYQ7Z589 1322 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 PMM2O15305 246 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 N4BP1O75113 896 aaKnown RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 PPP3CAQ08209 521 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 ARMCX2Q7L311 632 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 PLPPR4Q7Z2D5 763 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 ASAP3Q8TDY4 903 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 INTS2Q9H0H0 1204 aaKnown RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 AZI2Q9H6S1 392 aa20.24■□□□□ 0.83
CTSA-201ENST00000191018 DIS3Q9Y2L1 958 aaKnown RBP20.24■□□□□ 0.83
CTSA-201ENST00000191018 STRNO43815 780 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 MAFO75444 373 aaPredicted RBP20.23■□□□□ 0.83
CTSA-201ENST00000191018 GARTP22102 1010 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 ADORA2AP29274 412 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 MAGEA1P43355 309 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 TUBB2AQ13885 445 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 SNRNP35Q16560 246 aaKnown RBP20.23■□□□□ 0.83
CTSA-201ENST00000191018 SLC18A3Q16572 532 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 GJB7Q6PEY0 223 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 CBWD2Q8IUF1 395 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 DHX37Q8IY37 1157 aaKnown RBP20.23■□□□□ 0.83
CTSA-201ENST00000191018 BBXQ8WY36 941 aaPredicted RBP20.23■□□□□ 0.83
CTSA-201ENST00000191018 TUBB2BQ9BVA1 445 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 DUSP10Q9Y6W6 482 aa20.23■□□□□ 0.83
CTSA-201ENST00000191018 GOLGA8IPA6NC78 632 aa20.22■□□□□ 0.83
CTSA-201ENST00000191018 GOLGA8JA6NMD2 632 aa20.22■□□□□ 0.83
CTSA-201ENST00000191018 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
CTSA-201ENST00000191018 TXNP10599 105 aaKnown RBP20.22■□□□□ 0.83
CTSA-201ENST00000191018 ARID5AQ03989 594 aa20.22■□□□□ 0.83
CTSA-201ENST00000191018 TTLL4Q14679 1199 aa20.22■□□□□ 0.83
CTSA-201ENST00000191018 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms