RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Tgoln2Q62314 363 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Acot5Q6Q2Z6 421 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 PoliQ6R3M4 717 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Slc38a7Q8BWH0 463 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Pms1Q8K119 917 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Kri1Q8VDQ9 704 aaKnown RBP12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Phf14Q9D4H9 881 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 GdaQ9R111 454 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Gm9573F7C950 1606 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Igkv17-121A0A0G2JFA8 117 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Klhdc7bA0A286YD60 1263 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Pdia3P27773 505 aaKnown RBP12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Evx2P49749 475 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Asprv1Q09PK2 339 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Gtf2f1Q3THK3 508 aaKnown RBP12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Grhl3Q5FWH3 603 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tnni3kQ5GIG6 834 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Kcna4Q61423 654 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tmem59lQ7TNI2 337 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mical2Q8BML1 960 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Rd3Q8BRE0 195 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tmem161aQ8VCA6 480 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Insl5Q9WUG6 135 aa12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 AdnpQ9Z103 1108 aaKnown RBP12.19□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tbc1d2B1AVH7 922 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zscan20B2KFW1 1030 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zfp1P08042 402 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Nkx1-2P42580 305 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Smpd1Q04519 627 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Hook2Q7TMK6 716 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Trim17Q7TPM3 477 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tada3Q8R0L9 432 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 AacsQ9D2R0 672 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Pex10B1AUE5 324 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Vmn2r23E9PXI5 849 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zfp213E9QAW0 468 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 GclmO09172 274 aaKnown RBP12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Bcat1P24288 386 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Ca8P28651 291 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Psmc5P62196 406 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mars2Q499X9 586 aaKnown RBP12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zbtb8osQ505B7 168 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Rad9bQ6WBX7 403 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Nap1l4Q78ZA7 375 aaKnown RBP12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tnfsf13bQ9WU72 309 aa12.18□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zfhx2Q2MHN3 2562 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Vmn2r87E9PZX4 848 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Aldh1a7O35945 501 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 AladP10518 330 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Shroom1Q5SX79 823 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Asap3Q5U464 904 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mre11Q61216 706 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Slc39a10Q6P5F6 833 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 ToporsQ80Z37 1033 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Amz1Q8BVF9 502 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Def6Q8C2K1 630 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Eif2b5Q8CHW4 717 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Nat10Q8K224 1024 aaKnown RBP12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Ackr4Q924I3 350 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 CenppQ9CZ92 286 aa12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 GatmQ9D964 423 aaKnown RBP12.17□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Gprin2D3Z1D7 455 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Chrna1P04756 457 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Pcif1P59114 706 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Cd163Q2VLH6 1121 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Ccdc172Q810N9 267 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Inpp5fQ8CDA1 1132 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Lrrc66Q8K0B3 872 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Znf445Q8R2V3 986 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Hs2st1Q8R3H7 356 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Olfr395Q8VGR3 312 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Pebp4Q9D9G2 242 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Samd1D3YXK1 519 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tmem132bF7BAB2 1078 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 UgcgO88693 394 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mpp3O88910 568 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 LmnaP48678 665 aaKnown RBP12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 AdprhP54923 362 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Wbp1P97764 304 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Kmt5aQ2YDW7 349 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Ltbp3Q61810 1268 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Fhod1Q6P9Q4 1197 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Prss50Q8BLH5 439 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Rspry1Q8BVR6 576 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Osbpl6Q8BXR9 959 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Mamdc2Q8CG85 686 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 MajinQ9D992 256 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 KnstrnQ9D9Z1 312 aaKnown RBP12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Col4a3bpQ9EQG9 624 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Fut2Q9JL27 347 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tob2Q9JM55 345 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Tlr2Q9QUN7 784 aa12.16□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Zfp40B1B1D3 796 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 EgfP01132 1217 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Ercc5P35689 1170 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Foxp1P58462 705 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Nrp1P97333 923 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Lrrc36Q3V0M2 755 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Upb1Q8VC97 393 aa12.15□□□□□ -0.46
Ccdc60-202ENSMUST00000086483 Wrnip1Q91XU0 660 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms