RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mapre1Q61166 268 aaKnown RBP12.65□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ces1Q8VCC2 565 aa12.65□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rrp1bQ91YK2 724 aaKnown RBP12.65□□□□□ -0.39
Trim56-201ENSMUST00000054384 Atp10aO54827 1508 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 TdrkhQ80VL1 560 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pnpt1Q8K1R3 783 aaKnown RBP12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Olfr390Q8VEZ7 311 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Casp4P70343 373 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 GmipQ6PGG2 971 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tlk1Q8C0V0 766 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Slain2Q8CI08 581 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Eps8l1Q8R5F8 716 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Mcl1P97287 331 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Atp11aP98197 1187 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Olfml3Q8BK62 406 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Trpa1Q8BLA8 1125 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ttc22Q8C159 568 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Hic2Q9JLZ6 619 aaKnown RBP12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Arl6ip4Q9JM93 229 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Arhgef40Q3UPH7 1517 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Usp19Q3UJD6 1360 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 EgfrQ01279 1210 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm10392Q3V3I3 114 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Slc13a5Q67BT3 572 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ankrd13aQ80UP5 588 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Morc2bQ8C5W4 1022 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 EpgnQ924X1 152 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pi16Q9ET66 489 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ifit3bE9PV48 403 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Kcna2P63141 499 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Arhgap15Q811M1 481 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cul3Q9JLV5 768 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cyp3a57D3YYZ0 503 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pacsin1Q61644 441 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Twf1Q91YR1 350 aaKnown RBP12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pdia6Q922R8 440 aaKnown RBP12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cbx8Q9QXV1 362 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Plod1Q9R0E2 728 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Arhgef11Q68FM7 1552 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Kif24Q6NWW5 1356 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Wfs1P56695 890 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ccdc151Q8BSN3 593 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Osbpl10S4R1M9 766 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 Map3k4O08648 1597 aa12.64□□□□□ -0.39
Trim56-201ENSMUST00000054384 KitP05532 979 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cd22P35329 862 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Abce1P61222 599 aaKnown RBP12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 LRWD1Q8BUI3 648 aaKnown RBP12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Q8CEZ4 452 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Zkscan3Q91VW9 553 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dmap1Q9JI44 468 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Igsf1Q7TQA1 1317 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ifi207E9Q3L4 978 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dynll1P63168 89 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 BegainQ68EF6 600 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tmem179Q8BHH9 233 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pcdhb15Q91Y04 786 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Coa7Q921H9 231 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Atp11cQ9QZW0 1129 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rbm46P86049 533 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Slc7a14Q8BXR1 771 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Lamc1P02468 1607 aaKnown RBP12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Sstr3P30935 428 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Lrig2Q52KR2 1054 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 AarsQ8BGQ7 968 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cnpy3Q9DAU1 276 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Acad12D3Z7X0 555 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Trappc3O55013 180 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Soat2O88908 525 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 CiitaP79621 1155 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Trim62Q80V85 475 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Snip1Q8BIZ6 383 aaKnown RBP12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Msi2Q920Q6 346 aaKnown RBP12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Smyd3Q9CWR2 428 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Abcg8Q9DBM0 673 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tlr2Q9QUN7 784 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Kat6bQ8BRB7 1872 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm4869A0A1B0GSG7 984 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Acnat1A2AKK5 416 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Vmn2r79E9Q067 851 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm8926L7MUE8 181 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Arhgap6O54834 987 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 CatspereP0DP43 985 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 RasefQ5RI75 627 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rasa3Q60790 834 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Atp5dQ9D3D9 168 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Nos1Q9Z0J4 1429 aa12.63□□□□□ -0.39
Trim56-201ENSMUST00000054384 Adrm1Q9JKV1 407 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Sema3eP70275 775 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Spag6Q3V0U9 509 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 HltfQ6PCN7 1003 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ireb2Q811J3 963 aaKnown RBP12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fam49aQ8BHZ0 323 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tjap1Q9DCD5 539 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fem1bQ9Z2G0 627 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Adgrf5G5E8Q8 1348 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Lbhd1A0A087WPA0 259 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm7942L7N277 499 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fhod1Q6P9Q4 1197 aa12.62□□□□□ -0.39
Trim56-201ENSMUST00000054384 Vmn1r191Q8K4D0 298 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms