RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Spata7Q80VP2 582 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Matr3Q8K310 846 aaKnown RBP9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Adgrg3Q8R0T6 542 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mical1Q8VDP3 1048 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Smyd3Q9CWR2 428 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 VasnQ9CZT5 673 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Atp13a1Q9EPE9 1200 aaKnown RBP9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cnga3Q9JJZ8 631 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Hmgn5Q9JL35 406 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Wnt8bQ9WUD6 350 aa9.71□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ttll8A4Q9F1 832 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Vmn2r87E9PZX4 848 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 MybP06876 636 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Acvr2bP27040 536 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Rpl13P47963 211 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Hmgb1P63158 215 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Asprv1Q09PK2 339 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Krt39Q6IFX4 482 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 IqceQ6PCQ0 778 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ano5Q75UR0 904 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Elac2Q80Y81 831 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Armcx3Q8BHS6 379 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tcaf1Q8BNE1 924 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Znf467Q8JZL0 594 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Slc5a4aQ9ET37 656 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Chaf1aQ9QWF0 911 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Abhd2Q9QXM0 425 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gyg1Q9R062 333 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Nek3Q9R0A5 511 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Arid2E9Q7E2 1828 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mmrn2A6H6E2 943 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pate3B3GLJ3 98 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ugt1a6bK9J7B2 531 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cyth3O08967 399 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cetn3O35648 167 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Fmr1P35922 614 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 AdssP46664 456 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm11487Q5RIS0 354 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ugt1a6Q64435 531 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ugt1a7cQ6ZQM8 531 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Slc7a6osQ7TPE5 306 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Suz12Q80U70 741 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Chtf18Q8BIW9 969 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Adnp2Q8CHC8 1165 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 FcrlaQ920A9 352 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 1700016D06RikQ9DAA5 166 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Trpm5Q9JJH7 1158 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Galk1Q9R0N0 392 aa9.7□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gucy2dA0A0U1RPR8 1117 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm13084A2A8N0 494 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Slc16a6B1AT66 607 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm12800B1AUV4 484 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Brpf3B2KF05 1204 aaKnown RBP9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Vmn2r55G3UWZ4 781 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm3383J3QQ59 259 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm12794L7MTS5 483 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm3164L7N2B9 238 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm3264L7N2C5 238 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Vmn2r53L7N473 806 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Kng1O08677 661 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 P01644 108 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 P01645 108 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 P01646 108 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 P01647 108 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 TdgP56581 421 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cfap157Q0VFX2 523 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Hexim2Q3TVI4 313 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Dzip3Q7TPV2 1204 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Celf4Q7TSY6 486 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cnksr3Q8BMA3 555 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Q8C5S3 137 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Bbs7Q8K2G4 715 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Alas1Q8VC19 642 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Galnt15Q9D2N8 638 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 March8Q9DBD2 286 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Rab27aQ9ERI2 221 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tll2Q9WVM6 1012 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Knop1Q9Z2Q2 478 aaKnown RBP9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Casp8ap2Q9WUF3 1962 aa9.69□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm3252E9PUT9 216 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm3468E9QAJ8 216 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Prl6a1O35257 230 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tp53P02340 387 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Prl2c2P04095 224 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Wnt7bP28047 349 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tulp2P46686 562 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pcbp1P60335 356 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Zc3h18Q0P678 948 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Oas1fQ14AZ4 364 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Samd11Q1RNF8 542 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Palb2Q3U0P1 1104 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Frmd8Q3UFK8 466 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 R3hdm4Q4VBF2 262 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ptpn18Q61152 453 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mns1Q61884 491 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Znf280dQ68FE8 974 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Git1Q68FF6 770 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Inppl1Q6P549 1257 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Smarca1Q6PGB8 1046 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Phf24Q80TL4 400 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms