RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TTLL4Q14679 1199 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 PPP2R5AQ15172 486 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 ZNF792Q3KQV3 632 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 FBXO16Q8IX29 292 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-216ENST00000641375 CCDC170Q8IYT3 715 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 XPNPEP1Q9NQW7 623 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 PPME1Q9Y570 386 aa17.99■□□□□ 0.47
PHGDH-216ENST00000641375 GTPBP10A4D1E9 387 aaKnown RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 NOP56O00567 594 aaKnown RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 EPHB6O15197 1021 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 NDUFA10O95299 355 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 ARIH2O95376 493 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 EMC2Q15006 297 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 FAM110CQ1W6H9 321 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 CCDC62Q6P9F0 684 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 ARMCX2Q7L311 632 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 MAP4K3Q8IVH8 894 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 DHX37Q8IY37 1157 aaKnown RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 SLC7A3Q8WY07 619 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 PCYT2Q99447 389 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 DHX33Q9H6R0 707 aaKnown RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 TBX20Q9UMR3 447 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 CYLC1P35663 651 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 RFC5P40937 340 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 EXOC3L4Q17RC7 722 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 PTPN18Q99952 460 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 LSM14BQ9BX40 385 aaKnown RBP17.98■□□□□ 0.47
PHGDH-216ENST00000641375 PLCB1Q9NQ66 1216 aa17.98■□□□□ 0.47
PHGDH-216ENST00000641375 DENND3A2RUS2 1198 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 TXNP10599 105 aaKnown RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 GBP6Q6ZN66 633 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 RRAGAQ7L523 313 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 BAP1Q92560 729 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 GPR20Q99678 358 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 CRACR2AQ9BSW2 395 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 POLR3FQ9H1D9 316 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 MAPK13O15264 365 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 NOL4O94818 638 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 TRIM65Q6PJ69 517 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 INTS8Q75QN2 995 aaKnown RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 SYN2Q92777 582 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 SPATA33Q96N06 139 aa17.97■□□□□ 0.47
PHGDH-216ENST00000641375 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
PHGDH-216ENST00000641375 LRRC53A6NM62 1247 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 LGR5O75473 907 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 IPO7O95373 1038 aaKnown RBP17.96■□□□□ 0.47
PHGDH-216ENST00000641375 KRT13P13646 458 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 ZSCAN20P17040 1043 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-216ENST00000641375 MAPK4P31152 587 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 KRT83P78385 493 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 SYT10Q6XYQ8 523 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 PLPPR4Q7Z2D5 763 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 EXOC8Q8IYI6 725 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 MYRIPQ8NFW9 859 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 BBXQ8WY36 941 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-216ENST00000641375 GLG1Q92896 1179 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-216ENST00000641375 PHLPP2Q6ZVD8 1323 aa17.96■□□□□ 0.47
PHGDH-216ENST00000641375 SLC26A2P50443 739 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 SOX10P56693 466 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 BFSP1Q12934 665 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 TARBP2Q15633 366 aaKnown RBP17.96■□□□□ 0.46
PHGDH-216ENST00000641375 PDXDC1Q6P996 788 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 KCNN1Q92952 543 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 ZCCHC17Q9NP64 241 aaKnown RBP17.96■□□□□ 0.46
PHGDH-216ENST00000641375 HSPBP1Q9NZL4 362 aa17.96■□□□□ 0.46
PHGDH-216ENST00000641375 EMSYQ7Z589 1322 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 CNGA1P29973 690 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 POLR2FP61218 127 aaKnown RBP17.95■□□□□ 0.46
PHGDH-216ENST00000641375 GRB14Q14449 540 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 ARHGAP29Q52LW3 1261 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 DPP9Q86TI2 863 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 ACRBPQ8NEB7 543 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 CCDC42Q96M95 316 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 CEP89Q96ST8 783 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 KIFC3Q9BVG8 833 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 ARHGAP28Q9P2N2 729 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 FBXL5Q9UKA1 691 aa17.95■□□□□ 0.46
PHGDH-216ENST00000641375 MANSC4A6NHS7 340 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-216ENST00000641375 PON1P27169 355 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 ZNF157P51786 506 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-216ENST00000641375 BRDTQ58F21 947 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-216ENST00000641375 MAMDC4Q6UXC1 1216 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 CBWD1Q9BRT8 395 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 NLRC4Q9NPP4 1024 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 EIF3CLB5ME19 914 aaKnown RBP17.94■□□□□ 0.46
PHGDH-216ENST00000641375 NAMPTP43490 491 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 FMO5P49326 533 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms