RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MXD4Q14582 209 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TARBP2Q15633 366 aaKnown RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 MEA1Q16626 185 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 BRDTQ58F21 947 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 IER5Q5VY09 327 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 CEP135Q66GS9 1140 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PLA2G4FQ68DD2 849 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 IQSEC1Q6DN90 963 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 XXYLT1Q8NBI6 393 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ATP8B4Q8TF62 1192 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 GLG1Q92896 1179 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 SPATA33Q96N06 139 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TTYH3Q9C0H2 523 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 C2orf40Q9H1Z8 148 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TMEM134Q9H6X4 195 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ERAP1Q9NZ08 941 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 CEP72Q9P209 647 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 ZNF215Q9UL58 517 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TBX20Q9UMR3 447 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 SIK3Q9Y2K2 1263 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 PAXBP1Q9Y5B6 917 aa10.65□□□□□ -0.7
PHGDH-215ENST00000641371 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 CCDC169A6NNP5 214 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 MAGEB2O15479 319 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 TLR2O60603 784 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 EXOC3O60645 756 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 ANXA13P27216 316 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.716e-7■■■■□ 19.4
PHGDH-215ENST00000641371 ADKP55263 362 aaKnown RBP10.64□□□□□ -0.71
PHGDH-215ENST00000641371 MCCD1P59942 119 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-215ENST00000641371 KRT83P78385 493 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 SP4Q02446 784 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 STRN3Q13033 797 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 MAP2K5Q13163 448 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 MTERF2Q49AM1 385 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 ZNF484Q5JVG2 852 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 GBP6Q6ZN66 633 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 CACNA2D4Q7Z3S7 1137 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 FBXO16Q8IX29 292 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-215ENST00000641371 TMEM161BQ8NDZ6 487 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 MAML3Q96JK9 1138 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 FAM81BQ96LP2 452 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 PTPN18Q99952 460 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 POLR3FQ9H1D9 316 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-215ENST00000641371 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
PHGDH-215ENST00000641371 ARHGAP28Q9P2N2 729 aa10.64□□□□□ -0.71
PHGDH-215ENST00000641371 DENND3A2RUS2 1198 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 AKAP3O75969 853 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 LDHAP00338 332 aaKnown RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 PIGRP01833 764 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 GTF2H1P32780 548 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 ARL2P36404 184 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 RGS2P41220 211 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 POU5F1BQ06416 359 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 BFSP1Q12934 665 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 TFDP1Q14186 410 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 EXOC3L4Q17RC7 722 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 LY6KQ17RY6 165 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 DUSP28Q4G0W2 176 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 TAPT1Q6NXT6 567 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 ZNF662Q6ZS27 426 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 ZBTB8OSQ8IWT0 167 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 DEPTORQ8TB45 409 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 PSPC1Q8WXF1 523 aaKnown RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 BORCS6Q96GS4 357 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 MMRN2Q9H8L6 949 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 PLAGL2Q9UPG8 496 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
PHGDH-215ENST00000641371 SIP14410 1827 aa10.63□□□□□ -0.71
PHGDH-215ENST00000641371 SSU72P8A0A1W2PR75 194 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 TMEM88BA6NKF7 163 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 SLC16A4O15374 487 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 ARIH2O95376 493 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 HOXD8P13378 290 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-215ENST00000641371 TNNT1P13805 278 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 ATP4AP20648 1035 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 TM4SF4P48230 202 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 CDC42EP1Q00587 391 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 ARHGAP1Q07960 439 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 FSTL1Q12841 308 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms