RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NXF1Q9UBU9 619 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 AMACRQ9UHK6 382 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 PP2D1A8MPX8 630 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 E9PMD0 336 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 NR1I3Q14994 352 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 OR6B2Q6IFH4 312 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 CCDC137Q6PK04 289 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 RFX8Q6ZV50 586 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 GUF1Q8N442 669 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 ZNF229Q9UJW7 825 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 PGM1P36871 562 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 TRPC1P48995 793 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 DHX34Q14147 1143 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
COL11A1-211ENST00000635193 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
COL11A1-211ENST00000635193 RNF103-CHMP3A0A140T963 221 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 TCP11X1B4DZS4 312 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 DAB1O75553 588 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 AP1B1Q10567 949 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 SGMS1Q86VZ5 419 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 DTX3LQ8TDB6 740 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ADAM22Q9P0K1 906 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 DLGAP2Q9P1A6 1054 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 GDF11O95390 407 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 KRT14P02533 472 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 RABGAP1LQ5R372 815 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 RAD9BQ6WBX8 426 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 SGSM3Q96HU1 749 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 NOD2Q9HC29 1040 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 USP15Q9Y4E8 981 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ERVV-1B6SEH8 477 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 KRT38O76015 456 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 PSMA2P25787 234 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 FXR1P51114 621 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 OCRLQ01968 901 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 KCNB1Q14721 858 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ERICH1Q86X53 443 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 APLFQ8IW19 511 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 FBXL13Q8NEE6 735 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 NUP85Q9BW27 656 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 RHBDL2Q9NX52 303 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 KITP10721 976 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 SKOR1P84550 965 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 THOC5Q13769 683 aaKnown RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 CYB5D1Q6P9G0 228 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 CATSPER1Q8NEC5 780 aa12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ADD3Q9UEY8 706 aaKnown RBP12.44□□□□□ -0.42
COL11A1-211ENST00000635193 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 OATP04181 439 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 S100BP04271 92 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 FCER1AP12319 257 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ALX1Q15699 326 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CEP55Q53EZ4 464 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ANKRD40Q6AI12 368 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 TRPM8Q7Z2W7 1104 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 PIGOQ8TEQ8 1089 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 TEKT4Q8WW24 435 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 HSPH1Q92598 858 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 SNF8Q96H20 258 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 BTBD6Q96KE9 485 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 TTC7AQ9ULT0 858 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 DRAP1Q14919 205 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 KRT39Q6A163 491 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 BZW1Q7L1Q6 419 aaKnown RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 KLC2Q9H0B6 622 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 KRT75O95678 551 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 FAM107AO95990 144 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 APOA1P02647 267 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CYP2D6P10635 497 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CHN1P15882 459 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 IGBP1P78318 339 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 AP3B2Q13367 1082 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 MIS18BP1Q6P0N0 1132 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 TRIM59Q8IWR1 403 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CYP4F11Q9HBI6 524 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 TRIM10Q9UDY6 481 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms