RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SUN1O94901 812 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 ABCB4P21439 1286 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 PEX19P40855 299 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 CDK8P49336 464 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 ARSHQ5FYA8 562 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 GBP7Q8N8V2 638 aaPredicted RBP15.25■□□□□ 0.03
LDB3-209ENST00000623056 CEP120Q8N960 986 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 NEDD1Q8NHV4 660 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 MGARPQ8TDB4 240 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 ALG3Q92685 438 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDB3-209ENST00000623056 STK38LQ9Y2H1 464 aa15.25■□□□□ 0.03
LDB3-209ENST00000623056 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
LDB3-209ENST00000623056 NAV1Q8NEY1 1877 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 FAM170AA1A519 330 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 EVI5O60447 810 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 VCAM1P19320 739 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 HOXD13P35453 343 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 ICA1Q05084 483 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 KNOP1Q1ED39 458 aaKnown RBP15.24■□□□□ 0.03
LDB3-209ENST00000623056 AADACL2Q6P093 401 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 EXOC3L1Q86VI1 746 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 TXNRD3Q86VQ6 643 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 DYDC1Q8WWB3 177 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 CEP95Q96GE4 821 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 TMOD4Q9NZQ9 345 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 MTRF1LQ9UGC7 380 aaKnown RBP15.24■□□□□ 0.03
LDB3-209ENST00000623056 PNMA3Q9UL41 463 aa15.24■□□□□ 0.03
LDB3-209ENST00000623056 CORO1CQ9ULV4 474 aaPredicted RBP15.24■□□□□ 0.03
LDB3-209ENST00000623056 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
LDB3-209ENST00000623056 EME2A4GXA9 379 aaPredicted RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 PHF2O75151 1096 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 LMNB1P20700 586 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 STAT1P42224 750 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 MSH2P43246 934 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 ASRGL1Q7L266 308 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 CTNNBL1Q8WYA6 563 aaPredicted RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 SLC35C1Q96A29 364 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 IFT74Q96LB3 600 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 HOMER3Q9NSC5 361 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 SPATS2LQ9NUQ6 558 aaKnown RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 MYH14Q7Z406 1995 aaKnown RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 LIN7AO14910 233 aaPredicted RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 ATP2A2P16615 1042 aaKnown RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 CASP4P49662 377 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 SLC12A3P55017 1021 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
LDB3-209ENST00000623056 BLMHQ13867 455 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 ANKRD20A2Q5SQ80 823 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 ANKRD20A1Q5TYW2 823 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 ANKRD20A3Q5VUR7 823 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 MFSD5Q6N075 450 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 TRIM33Q9UPN9 1127 aa15.23■□□□□ 0.03
LDB3-209ENST00000623056 PITPNM2Q9BZ72 1349 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 GJB6O95452 261 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 LDHBP07195 334 aaKnown RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 CHRNA3P32297 505 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 GBP1P32455 592 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 LACTBP83111 547 aaPredicted RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 CLUL1Q15846 466 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 C16orf86Q6ZW13 317 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 PRELID2Q8N945 189 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 ARL2BPQ9Y2Y0 163 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 PCDHA3Q9Y5H8 950 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 O00370 1275 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 BAG3O95817 575 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 RARGP13631 454 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 PLCG2P16885 1265 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 SOX5P35711 763 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 TTC27Q6P3X3 843 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 OTUD6AQ7L8S5 288 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 SPATA21Q7Z572 469 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 FITM2Q8N6M3 262 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 MOV10L1Q9BXT6 1211 aaKnown RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 RXFP1Q9HBX9 757 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 METTL14Q9HCE5 456 aaKnown RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 RGS17Q9UGC6 210 aaPredicted RBP15.22■□□□□ 0.03
LDB3-209ENST00000623056 PCYOX1Q9UHG3 505 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 COG5Q9UP83 839 aa15.22■□□□□ 0.03
LDB3-209ENST00000623056 PODXLO00592 558 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 PDXKO00764 312 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 MED24O75448 989 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 NR3C1P04150 777 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 ABL2P42684 1182 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 CCNG1P51959 295 aa15.21■□□□□ 0.03
LDB3-209ENST00000623056 SARNPP82979 210 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms