RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LYPLA2O95372 231 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ARP10275 920 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 TNFAIP3P21580 790 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 HSD17B3P37058 310 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ECE1P42892 770 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 CCT5P48643 541 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 HSD17B4P51659 736 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 SNRPFP62306 86 aaKnown RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 COG2Q14746 738 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 UAP1Q16222 522 aaPredicted RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 AOC3Q16853 763 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ODR4Q5SWX8 454 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 MAATS1Q7Z4T9 603 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 SPATS2Q86XZ4 545 aaKnown RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 DAW1Q8N136 415 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ARFGAP2Q8N6H7 521 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 SLC35G2Q8TBE7 412 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 BCAS4Q8TDM0 211 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 AGPAT1Q99943 283 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ZNF577Q9BSK1 485 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 CARD9Q9H257 536 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 IKZF4Q9H2S9 585 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 GOLPH3Q9H4A6 298 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ST6GALNAC4Q9H4F1 302 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 WRAP73Q9P2S5 460 aaPredicted RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 APEX2Q9UBZ4 518 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 DBR1Q9UK59 544 aaKnown RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 FEM1BQ9UK73 627 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 ZBTB21Q9ULJ3 1066 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 CNTNAP1P78357 1384 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 PFASO15067 1338 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ANKRD62A6NC57 917 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 YDJCA8MPS7 323 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ZBTB39O15060 712 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CHMP2AO43633 222 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 KRT14P02533 472 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ITGA4P13612 1032 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 KRT13P13646 458 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 NR1D1P20393 614 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 MDH1P40925 334 aaKnown RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CYP2J2P51589 502 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 PTENP60484 403 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 BFSP1Q12934 665 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ITGB3BPQ13352 177 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 BIRC3Q13489 604 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 GRIPAP1Q4V328 841 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CBWD6Q4V339 395 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CBWD3Q5JTY5 395 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CBWD5Q5RIA9 395 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 FKBP1CQ5VVH2 108 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CCDC174Q6PII3 467 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 RUFY4Q6ZNE9 571 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 B4GALNT4Q76KP1 1039 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 DAAM2Q86T65 1068 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 DNAAF5Q86Y56 855 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 GLYCTKQ8IVS8 523 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 KSR1Q8IVT5 923 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SH2D3CQ8N5H7 860 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SAMD3Q8N6K7 520 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 PPM1EQ8WY54 764 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 CTNNBL1Q8WYA6 563 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 RNPC3Q96LT9 517 aaKnown RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ACCSQ96QU6 501 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 GMLQ99445 158 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 TIPINQ9BVW5 301 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 AP1M1Q9BXS5 423 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 DDX47Q9H0S4 455 aaKnown RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 EPN3Q9H201 632 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 NEUROG2Q9H2A3 272 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 PLEKHA4Q9H4M7 779 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 TMEM206Q9H813 350 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ZNF70Q9UC06 446 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 GGA2Q9UJY4 613 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
IGHV3-54-201ENST00000622166 ZNF536O15090 1300 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 IGSF9BQ9UPX0 1349 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 MIF4GDA9UHW6 222 aaKnown RBP10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 IPO5O00410 1097 aaKnown RBP10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 EXOC3O60645 756 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 MTA2O94776 668 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 P4HBP07237 508 aaKnown RBP10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 TRIM49P0CI25 452 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 TRIM49CP0CI26 452 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 HSPA6P17066 643 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 LSP1P33241 339 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 PTGER2P43116 358 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 DRG2P55039 364 aaKnown RBP10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 PDCLQ13371 301 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 PTGISQ16647 500 aa10.42□□□□□ -0.74
IGHV3-54-201ENST00000622166 EPC2Q52LR7 807 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms