RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 C2orf16Q68DN1 1984 aa18.9■□□□□ 0.62
TARDBP-225ENST00000621715 RIF1Q5UIP0 2472 aaKnown RBP18.9■□□□□ 0.62
TARDBP-225ENST00000621715 H0Y858 1186 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 SRGAP2BP0DMP2 458 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 EPCAMP16422 314 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 KRT17Q04695 432 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 TMEM105Q8N8V8 129 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 NLRP7Q8WX94 980 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 CASP10Q92851 521 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 ZBP1Q9H171 429 aa18.89■□□□□ 0.61
TARDBP-225ENST00000621715 NCOA5Q9HCD5 579 aaKnown RBP18.89■□□□□ 0.61
TARDBP-225ENST00000621715 PTPRZ1P23471 2315 aaPredicted RBP18.89■□□□□ 0.61
TARDBP-225ENST00000621715 CXCL14O95715 111 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 TMOD1P28289 359 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 PHKA2P46019 1235 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 RARS2Q5T160 578 aaKnown RBP18.88■□□□□ 0.61
TARDBP-225ENST00000621715 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 ZBTB33Q86T24 672 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 KSR1Q8IVT5 923 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
TARDBP-225ENST00000621715 PRRX2Q99811 253 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 TCEAL9Q9UHQ7 104 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
TARDBP-225ENST00000621715 A0A087WZ62 844 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 GFRA3O60609 400 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 GAS7O60861 476 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 ZC3H11AO75152 810 aaKnown RBP eCLIP18.87■□□□□ 0.61
TARDBP-225ENST00000621715 PSMD10O75832 226 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 TDP2O95551 362 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 EOMESO95936 686 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 GNA11P29992 359 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
TARDBP-225ENST00000621715 TBC1D8BQ0IIM8 1120 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 KRT32Q14532 448 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 MTERF2Q49AM1 385 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 LRCH2Q5VUJ6 765 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 VPS52Q8N1B4 723 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 SLC22A17Q8WUG5 538 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 SCLT1Q96NL6 688 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 RIT2Q99578 217 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 FDXACB1Q9BRP7 624 aaPredicted RBP18.87■□□□□ 0.61
TARDBP-225ENST00000621715 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 AGXT2Q9BYV1 514 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 NRDE2Q9H7Z3 1164 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 NRBP2Q9NSY0 501 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 DNAJB4Q9UDY4 337 aa18.87■□□□□ 0.61
TARDBP-225ENST00000621715 CCDC196A0A1B0GTZ2 297 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 ST18O60284 1047 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 CA8P35219 290 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 TPRNQ4KMQ1 711 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 ATOH1Q92858 354 aaPredicted RBP18.86■□□□□ 0.61
TARDBP-225ENST00000621715 NIFKQ9BYG3 293 aaKnown RBP18.86■□□□□ 0.61
TARDBP-225ENST00000621715 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 SEPT9Q9UHD8 586 aaPredicted RBP18.86■□□□□ 0.61
TARDBP-225ENST00000621715 SORCS3Q9UPU3 1222 aa18.86■□□□□ 0.61
TARDBP-225ENST00000621715 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 HMGB1P09429 215 aaKnown RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 HSPA4P34932 840 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 ALDH7A1P49419 539 aaKnown RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 CCT2P78371 535 aaKnown RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 FGD1P98174 961 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 ITIH3Q06033 890 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 MTMR3Q13615 1198 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 NPY5RQ15761 445 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 MCTP2Q6DN12 878 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 ZNF280BQ86YH2 543 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 ZNF579Q8NAF0 562 aaKnown RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 CCDC12Q8WUD4 166 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 IGSF21Q96ID5 467 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 SNX27Q96L92 541 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 TEKT3Q9BXF9 490 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 RNF26Q9BY78 433 aaPredicted RBP18.85■□□□□ 0.61
TARDBP-225ENST00000621715 LIMD1Q9UGP4 676 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 NR2E1Q9Y466 385 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 FRYLO94915 3013 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 FAM186AA6NE01 2351 aa18.85■□□□□ 0.61
TARDBP-225ENST00000621715 M0R2N6 131 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 GALR2O43603 387 aaPredicted RBP18.84■□□□□ 0.61
TARDBP-225ENST00000621715 CDC45O75419 566 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 OFD1O75665 1012 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 GALTP07902 379 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 CTSAP10619 480 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 IFNAR1P17181 557 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 PDIA3P30101 505 aaKnown RBP18.84■□□□□ 0.61
TARDBP-225ENST00000621715 SLC11A1P49279 550 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 USP11P51784 963 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 JAK3P52333 1124 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 PLA2G4FQ68DD2 849 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 KIAA1841Q6NSI8 718 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 CES5AQ6NT32 575 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 ANO5Q75V66 913 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 ASCL5Q7RTU5 278 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 FBXL16Q8N461 479 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 ETNPPLQ8TBG4 499 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 TMEM169Q96HH4 297 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 AIFM3Q96NN9 605 aa18.84■□□□□ 0.61
TARDBP-225ENST00000621715 NECTIN4Q96NY8 510 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms