RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 NDUFB10O96000 172 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 CPP00450 1065 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 RPA1P27694 616 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 CDC25CP30307 473 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 SOX5P35711 763 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 FMO5P49326 533 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 CUL1Q13616 776 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 DPY19L2P1Q6NXN4 242 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 LLGL2Q6P1M3 1020 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 TBC1D1Q86TI0 1168 aaPredicted RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 PRPF38AQ8NAV1 312 aaKnown RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 GDAP1Q8TB36 358 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 HOMER2Q9NSB8 354 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 SLC12A6Q9UHW9 1150 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 CAPN12Q6ZSI9 719 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 PRUNE1Q86TP1 453 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 SLFN12Q8IYM2 578 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 C1orf54Q8WWF1 131 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 KCNK9Q9NPC2 374 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 DLEC1Q9Y238 1755 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 PSMC2P35998 433 aaKnown RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 PPP1R18Q6NYC8 613 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 CNPY4Q8N129 248 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 PPM1KQ8N3J5 372 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 INTS2Q9H0H0 1204 aaKnown RBP17.36■□□□□ 0.37
DKC1-213ENST00000620277 FRMD4BQ9Y2L6 1034 aa17.36■□□□□ 0.37
DKC1-213ENST00000620277 PDXKO00764 312 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 RGS16O15492 202 aaPredicted RBP17.35■□□□□ 0.37
DKC1-213ENST00000620277 GYS1P13807 737 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 GKAP1Q5VSY0 366 aaPredicted RBP17.35■□□□□ 0.37
DKC1-213ENST00000620277 DENND2CQ68D51 928 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 HS2ST1Q7LGA3 356 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 TBC1D22AQ8WUA7 517 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 LENG9Q96B70 501 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 CLRN2A0PK11 232 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 PPEF1O14829 653 aaPredicted RBP17.35■□□□□ 0.37
DKC1-213ENST00000620277 CRKP46108 304 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 SP4Q02446 784 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 JAMLQ86YT9 394 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 ARHGEF19Q8IW93 802 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 LRRC34Q8IZ02 419 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 MREGQ8N565 214 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 ATG4AQ8WYN0 398 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 HVCN1Q96D96 273 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 PAIP2Q9BPZ3 127 aaKnown RBP17.35■□□□□ 0.37
DKC1-213ENST00000620277 CTNNAL1Q9UBT7 734 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 TRAF3IP3Q9Y228 551 aa17.35■□□□□ 0.37
DKC1-213ENST00000620277 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
DKC1-213ENST00000620277 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 SPOPO43791 374 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 PMS2P54278 862 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 MYL7Q01449 175 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 DDR1Q08345 913 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 MTM1Q13496 603 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 ZDHHC14Q8IZN3 488 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 ACER1Q8TDN7 264 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 DDX23Q9BUQ8 820 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 VCPKMTQ9H867 229 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 BZW2Q9Y6E2 419 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 GAKO14976 1311 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 A0A1W2PRG0 241 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 GAS7O60861 476 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 SLITRK3O94933 977 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 ARP10275 920 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 FERP16591 822 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 RPL21P46778 160 aaKnown RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 KIF2BQ8N4N8 673 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 TAB3Q8N5C8 712 aaPredicted RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 ZKSCAN4Q969J2 545 aaPredicted RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 LBHD1Q9BQE6 289 aaPredicted RBP17.34■□□□□ 0.37
DKC1-213ENST00000620277 CBWD1Q9BRT8 395 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 GPRC5CQ9NQ84 441 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 FBXO28Q9NVF7 368 aa17.34■□□□□ 0.37
DKC1-213ENST00000620277 LAMB1P07942 1786 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 GOLGA6L10A0A0M3HER8 536 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 K7ENM7 598 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 SGPL1O95470 568 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 MAP2K1Q02750 393 aaPredicted RBP17.33■□□□□ 0.37
DKC1-213ENST00000620277 ZFYVE27Q5T4F4 411 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 TTC27Q6P3X3 843 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 HEMGNQ9BXL5 484 aa17.33■□□□□ 0.37
DKC1-213ENST00000620277 PARVGQ9HBI0 331 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms