RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 E9PMD0 336 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 GPR182O15218 404 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 SPTLC2O15270 562 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ASAP2O43150 1006 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 SLC26A4O43511 780 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 NCK2O43639 380 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 MAFO75444 373 aaPredicted RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 GJB5O95377 273 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 YEATS4O95619 227 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 BMP15O95972 392 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 AMHP03971 560 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 VTNP04004 478 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 CCDC192P0DO97 292 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ACRP10323 421 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 SCP2P22307 547 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 THPOP40225 353 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 RARRES1P49788 294 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 KRT85P78386 507 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 POU5F1BQ06416 359 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 MAPK7Q13164 816 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 STK38Q15208 465 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TMEM266Q2M3C6 531 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 XKR9Q5GH70 373 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 C9orf50Q5SZB4 431 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TSHZ1Q6ZSZ6 1077 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 OTUD6AQ7L8S5 288 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 CABP7Q86V35 215 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 KSR1Q8IVT5 923 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 DAW1Q8N136 415 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ASAP3Q8TDY4 903 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 SNX29Q8TEQ0 813 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 UBE2Q2Q8WVN8 375 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TMEM40Q8WWA1 233 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 BSNDQ8WZ55 320 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 SYMPKQ92797 1274 aaKnown RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TOP1MTQ969P6 601 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TMEM143Q96AN5 459 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF396Q96N95 335 aaPredicted RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 PPP1R16BQ96T49 567 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 GAS2L1Q99501 681 aaPredicted RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 RUSC1Q9BVN2 902 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TRAIPQ9BWF2 469 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 IFIH1Q9BYX4 1025 aaKnown RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 RAB34Q9BZG1 259 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 RBSNQ9H1K0 784 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TSPYL2Q9H2G4 693 aaPredicted RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF576Q9H609 170 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 AGO3Q9H9G7 860 aaKnown RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TUFT1Q9NNX1 390 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 GPRC5CQ9NQ84 441 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 C1orf112Q9NSG2 853 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ANKEF1Q9NU02 776 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 DDX19AQ9NUU7 478 aaKnown RBP5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TMEM63CQ9P1W3 806 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 PCDHA7Q9UN72 937 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 KIAA1024Q9UPX6 916 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 LOXHD1Q8IVV2 1947 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 ARID2Q68CP9 1835 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 TRIOO75962 3097 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 PHLPP2Q6ZVD8 1323 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 TANC1Q9C0D5 1861 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 NPHP3-ACAD11A0A0J9YXS1 232 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 GOLGA6L4A6NEF3 574 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 HOXA2O43364 376 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PPP6R2O75170 966 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 GPR32O75388 356 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CSDE1O75534 798 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 TUBB4AP04350 444 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 RB1P06400 928 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 STAG3L1P0CL83 205 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 SKIP12755 728 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PLCG1P19174 1290 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 ARL2P36404 184 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 LONP1P36776 959 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CRYBB1P53674 252 aaPredicted RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 SLC12A3P55017 1021 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 WDR5P61964 334 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 MRPS6P82932 125 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 LPIN1Q14693 890 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 EMC2Q15006 297 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 ZRSR1Q15695 479 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 E2F4Q16254 413 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 AAK1Q2M2I8 961 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 KIZQ2M2Z5 673 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 FBXO47Q5MNV8 452 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 KRT79Q5XKE5 535 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 EFCAB12Q6NXP0 572 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PADI6Q6TGC4 694 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 ZNF410Q86VK4 478 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 HERC6Q8IVU3 1022 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 PLCD3Q8N3E9 789 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 METTL13Q8N6R0 699 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 KRI1Q8N9T8 703 aaKnown RBP5.82□□□□□ -1.48
SHMT1-211ENST00000618902 LINC01599Q8WXQ3 324 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 CEP170P1Q96L14 293 aa5.82□□□□□ -1.48
SHMT1-211ENST00000618902 AK8Q96MA6 479 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms