RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 ZC4H2Q9NQZ6 224 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 MAGED2Q9UNF1 606 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 GOLGA8MH3BSY2 632 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SRGNP10124 158 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 TAC1P20366 129 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 FGFR4P22455 802 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 TNFAIP1Q13829 316 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 HIC1Q14526 733 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SURF1Q15526 300 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 ALX1Q15699 326 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SLC18A3Q16572 532 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 PTGISQ16647 500 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 IZUMO3Q5VZ72 239 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 GLYCTKQ8IVS8 523 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 ZBED8Q8IZ13 594 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 CYP4F11Q9HBI6 524 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 FHOD1Q9Y613 1164 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 XDHP47989 1333 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 NVLO15381 856 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 RFX1P22670 979 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 COPS2P61201 443 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 GPS1Q13098 491 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 MMGT1Q8N4V1 131 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 PPME1Q9Y570 386 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SYCE1LA8MT33 242 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 GCLMP48507 274 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 TMEM154Q6P9G4 183 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 MS4A14Q96JA4 679 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 TMEM2Q9UHN6 1383 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 KCNA3P22001 575 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 LONP2Q86WA8 852 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 RNF169Q8NCN4 708 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 VPS11Q9H270 941 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 TRABDQ9H4I3 376 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 RBM12Q9NTZ6 932 aaKnown RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 SCHIP1Q9P0W5 487 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 E9PMD0 336 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 HSPH1Q92598 858 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 NGRNQ9NPE2 291 aaKnown RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ARHGEF5Q12774 1597 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ANXA13P27216 316 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 RHOT1Q8IXI2 618 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 SKA2Q8WVK7 121 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 L3MBTL1Q9Y468 752 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 KDM6BO15054 1643 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 CALB1P05937 261 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 HDAC4P56524 1084 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 AP1B1Q10567 949 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 CRYMQ14894 314 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 LRRC31Q6UY01 552 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ADSSL1Q8N142 457 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 C7orf31Q8N865 590 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 C11orf70Q9BRQ4 267 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ADA2Q9NZK5 511 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 ZBTB1Q9Y2K1 713 aa11.35□□□□□ -0.59
CLTCL1-209ENST00000617103 PI4K2BG5E9Z4 385 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 CDK8P49336 464 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 MECOMQ03112 1051 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 KRT17Q04695 432 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 REXO1L1PQ8IX06 675 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 C1orf54Q8WWF1 131 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 TRIM10Q9UDY6 481 aa11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-209ENST00000617103 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms