RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CCNHP51946 323 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 KRT83P78385 493 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 RAPGEF1Q13905 1077 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 BAATQ14032 418 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 CRYMQ14894 314 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 EPHA7Q15375 998 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 B4GALNT4Q76KP1 1039 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 APOBEC3FQ8IUX4 373 aaKnown RBP12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 CCDC170Q8IYT3 715 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 GPRC5CQ9NQ84 441 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 OLFML3Q9NRN5 406 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
PCDHGA9-202ENST00000616887 PDXKO00764 312 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 IPO7O95373 1038 aaKnown RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 MOCS3O95396 460 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 VAV2P52735 878 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CLNS1AP54105 237 aaKnown RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SP4Q02446 784 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 BMT2Q1RMZ1 405 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CEP85LQ5SZL2 805 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 WLSQ5T9L3 541 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 RNF187Q5TA31 235 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PLA2G4FQ68DD2 849 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 FAM178BQ8IXR5 827 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PSMB7Q99436 277 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 GANQ9H2C0 597 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 UBIAD1Q9Y5Z9 338 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 USO1O60763 962 aaKnown RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CCNE2O96020 404 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 MYBL2P10244 700 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CYP2J2P51589 502 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CDK17Q00537 523 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SPA17Q15506 151 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PCNX4Q63HM2 1172 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SNRNP48Q6IEG0 339 aaKnown RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 DPY19L2P1Q6NXN4 242 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PADI6Q6TGC4 694 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SLC35C1Q96A29 364 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 NACC1Q96RE7 527 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PDCD2LQ9BRP1 358 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 GPRC5DQ9NZD1 345 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 CEP72Q9P209 647 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 PPP2R3BQ9Y5P8 575 aa12.42□□□□□ -0.42
PCDHGA9-202ENST00000616887 KRT86O43790 486 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 GNA14O95837 355 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZNF720Q7Z2F6 126 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 RIT2Q99578 217 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 PXMP2Q9NR77 195 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 PICK1Q9NRD5 415 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 BUB1O43683 1085 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 NPEPPSP55786 919 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 KIF5AQ12840 1032 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 PDCLQ13371 301 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 TRAPPC11Q7Z392 1133 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 MCF2L2Q86YR7 1114 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 PACSIN1Q9BY11 444 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 MYO1AQ9UBC5 1043 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
PCDHGA9-202ENST00000616887 KLHL33A6NCF5 533 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 GLTPD2A6NH11 291 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 BACH1O14867 736 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 RARRES1P49788 294 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZNF131P52739 623 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 SOX10P56693 466 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 SFMBT2Q5VUG0 894 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 KIFC3Q9BVG8 833 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms