RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 DENND3A2RUS2 1198 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 STAT5BP51692 787 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 RTP1P59025 263 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 POLR2FP61218 127 aaKnown RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 MYBPC2Q14324 1141 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 ZNF792Q3KQV3 632 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 MAP4K3Q8IVH8 894 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 AFAP1L1Q8TED9 768 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 HVCN1Q96D96 273 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 GPR20Q99678 358 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 PCIF1Q9H4Z3 704 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 NHEJ1Q9H9Q4 299 aaPredicted RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 NLRC4Q9NPP4 1024 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 LZTFL1Q9NQ48 299 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 PDGFCQ9NRA1 345 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 TBX20Q9UMR3 447 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 EXOC7Q9UPT5 735 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 SIP14410 1827 aa10.96□□□□□ -0.66
AL353770.3-201ENST00000616253 ADGRA3Q8IWK6 1321 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 NOP56O00567 594 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 ACTN1P12814 892 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 CDK17Q00537 523 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 TTLL4Q14679 1199 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 EXOC3L4Q17RC7 722 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 HSDL1Q3SXM5 330 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 CCDC62Q6P9F0 684 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 DHX37Q8IY37 1157 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 COPS5Q92905 334 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 IFT74Q96LB3 600 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 SPATA33Q96N06 139 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 GANQ9H2C0 597 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 DHX33Q9H6R0 707 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 AZI2Q9H6S1 392 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 HSPBP1Q9NZL4 362 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 DNAI1Q9UI46 699 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 REXO2Q9Y3B8 237 aaKnown RBP10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 PHLPP2Q6ZVD8 1323 aa10.95□□□□□ -0.66
AL353770.3-201ENST00000616253 PLEKP08567 350 aaPredicted RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TRIM49P0CI25 452 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TRIM49CP0CI26 452 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TXNP10599 105 aaKnown RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 SLC9A1P19634 815 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 PON1P27169 355 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 CYLC1P35663 651 aaPredicted RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 SNRPFP62306 86 aaKnown RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 BFSP1Q12934 665 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 PPP2R5AQ15172 486 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 FAM110CQ1W6H9 321 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GBP6Q6ZN66 633 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GPR142Q7Z601 462 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 CCDC170Q8IYT3 715 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ABRAQ8N0Z2 381 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 RDH13Q8NBN7 331 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ASAP3Q8TDY4 903 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 SCFD2Q8WU76 684 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TMEM174Q8WUU8 243 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 SLC7A3Q8WY07 619 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GLG1Q92896 1179 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TMEM143Q96AN5 459 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 CEP89Q96ST8 783 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 NTPCRQ9BSD7 190 aaKnown RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GCNT4Q9P109 453 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GTPBP10A4D1E9 387 aaKnown RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ANKRD63C9JTQ0 380 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 FANCGO15287 622 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 STRNO43815 780 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 LGR5O75473 907 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 MARK3P27448 753 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 RFC5P40937 340 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 GNG11P61952 73 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TARBP2Q15633 366 aaKnown RBP10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ARHGAP29Q52LW3 1261 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 TMEM63BQ5T3F8 832 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 DPY19L2P1Q6NXN4 242 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 RASAL3Q86YV0 1011 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 XXYLT1Q8NBI6 393 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ZSWIM2Q8NEG5 633 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 FAM167AQ96KS9 214 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 PLCB1Q9NQ66 1216 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ARHGAP20Q9P2F6 1191 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 ARHGAP28Q9P2N2 729 aa10.94□□□□□ -0.66
AL353770.3-201ENST00000616253 KRT13P13646 458 aa10.93□□□□□ -0.66
AL353770.3-201ENST00000616253 ADSSP30520 456 aa10.93□□□□□ -0.66
AL353770.3-201ENST00000616253 FMO5P49326 533 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms