RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 TTLL1O95922 423 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 FAM107AO95990 144 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 PDE1AP54750 535 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 SLC39A10Q9ULF5 831 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 MTRF1O75570 445 aaKnown RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 EIF2AK2P19525 551 aaKnown RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 ALDH6A1Q02252 535 aaKnown RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 TRIP4Q15650 581 aaPredicted RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 HLA-DQA1Q5Y7H0 255 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 FBXO41Q8TF61 875 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 LZTS3O60299 673 aaPredicted RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 AP1G2O75843 785 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 HMBSP08397 361 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 PSMC3P17980 439 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 PWP1Q13610 501 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 TTC13Q8NBP0 860 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
TCF4-248ENST00000616053 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
TCF4-248ENST00000616053 SRGAP2O75044 1071 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 SLC44A4Q53GD3 710 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 CEP78Q5JTW2 689 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
TCF4-248ENST00000616053 GAP43P17677 238 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 AP3B2Q13367 1082 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 MAPK6Q16659 721 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 WDR91A4D1P6 747 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
TCF4-248ENST00000616053 TK2O00142 265 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 A1BGP04217 495 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
TCF4-248ENST00000616053 EIF2S1P05198 315 aaKnown RBP13.43□□□□□ -0.26
TCF4-248ENST00000616053 MZF1P28698 734 aaPredicted RBP13.43□□□□□ -0.26
TCF4-248ENST00000616053 BBS7Q8IWZ6 715 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 C6orf222P0C671 652 aaPredicted RBP13.43□□□□□ -0.26
TCF4-248ENST00000616053 PMS2P54278 862 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 IL31Q6EBC2 164 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 ELMO2Q96JJ3 720 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 BBS2Q9BXC9 721 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 CLTAP09496 248 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 PYGMP11217 842 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 LSP1P33241 339 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 GYG1P46976 350 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 TWF1Q12792 350 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 EFTUD2Q15029 972 aaKnown RBP eCLIP13.43□□□□□ -0.26
TCF4-248ENST00000616053 CCNYL1Q8N7R7 359 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 STK33Q9BYT3 514 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 XDHP47989 1333 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
TCF4-248ENST00000616053 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 NDUFS2O75306 463 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 ITGAXP20702 1163 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 OR6J1Q8NGC5 347 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 PRKD2Q9BZL6 878 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 PKP3Q9Y446 797 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 KIF21BO75037 1637 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 C21orf2O43822 256 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 H2AFYO75367 372 aaKnown RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 SERPINB4P48594 390 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 ZSCAN10Q96SZ4 725 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 RARBP10826 455 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 ENAHQ8N8S7 591 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 FBXO2Q9UK22 296 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 RHPN2Q8IUC4 686 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 SCFD1Q8WVM8 642 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 KCNS3Q9BQ31 491 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 DCDC2CA8MYV0 355 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 F5H423 210 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 SUN1O94901 812 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 NFICP08651 508 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 CTSHP09668 335 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 ALDH7A1P49419 539 aaKnown RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 PEX5P50542 639 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 HEY1Q9Y5J3 304 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 SEMA3EO15041 775 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 COPS2P61201 443 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 RCN1Q15293 331 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 DNAJC10Q8IXB1 793 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 BRD8Q9H0E9 1235 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 SPASTQ9UBP0 616 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 N6AMT1Q9Y5N5 214 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms